0 20 40 60 80 100 0 5 10 15 20 percentage of bases (500kb windows ...

"intron.I"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome I position (Mb)

20

"intron.II"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome II position (Mb)

20

"intron.III"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome III position (Mb)

20

"intron.IV"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome IV position (Mb)

20

"intron.V"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome V position (Mb)

20

"intron.X"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome X position (Mb)

20

"exon.I"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome I position (Mb)

20

"exon.II"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome II position (Mb)

20

"exon.III"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome III position (Mb)

20

"exon.IV"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome IV position (Mb)

20

"exon.V"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome V position (Mb)

20

"exon.X"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome X position (Mb)

20

"ortholog.I"

percentage of exons in orthologs (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome I position (Mb)

20

"ortholog.II"

percentage of exons in orthologs (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome II position (Mb)

20

"ortholog.III"

percentage of exons in orthologs (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome III position (Mb)

20

"ortholog.IV"

percentage of exons in orthologs (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome IV position (Mb)

20

"ortholog.V"

percentage of exons in orthologs (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome V position (Mb)

20

"ortholog.X"

percentage of exons in orthologs (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome X position (Mb)

20

"repeat.I"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome I position (Mb)

20

"repeat.II"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome II position (Mb)

20

"repeat.III"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome III position (Mb)

20

"repeat.IV"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome IV position (Mb)

20

"repeat.V"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome V position (Mb)

20

"repeat.X"

percentage of bases (500kb windows)

100

80

60

40

20

0 0

5

10 15 C. briggsae chromosome X position (Mb)

20

2400 "telomere.I"

number of telomeric repeats (500kb windows)

2200

2000

1800

1600

1400

1200

1000

800

600 0

5

10 15 C. briggsae chromosome I position (Mb)

20

2400 "telomere.II"

number of telomeric repeats (500kb windows)

2200

2000

1800

1600

1400

1200

1000

800

600 0

5

10 15 C. briggsae chromosome II position (Mb)

20

2400 "telomere.III"

number of telomeric repeats (500kb windows)

2200

2000

1800

1600

1400

1200

1000

800

600 0

5

10 15 C. briggsae chromosome III position (Mb)

20

2400 "telomere.IV"

number of telomeric repeats (500kb windows)

2200

2000

1800

1600

1400

1200

1000

800

600 0

5

10 15 C. briggsae chromosome IV position (Mb)

20

2400 "telomere.V"

number of telomeric repeats (500kb windows)

2200

2000

1800

1600

1400

1200

1000

800

600 0

5

10 15 C. briggsae chromosome V position (Mb)

20

2400 "telomere.X"

number of telomeric repeats (500kb windows)

2200

2000

1800

1600

1400

1200

1000

800

600 0

5

10 15 C. briggsae chromosome X position (Mb)

20