A B C D

5 downloads 0 Views 78KB Size Report
Figure S2 Nucleosome patterns across the transcription termination site and gene body of rice genes. Regions 1,000 bp upstream and downstream of the ...
B

A 160 140

Nucleosome occupancy

Nucleosome occupancy

180

PCG TEG TE PSG

180

120 100 80 60 -1000

-500 0 500 Distance from TTS (bp)

160 140

PCG TEG TE PSG

120 100 80 60 -1000 -500 TSS 0 500 1000 1500 TTS 2000 +500 2500 +1000 Relative distance (bp)

1000

D

C

170

150 145 140 135 130 -1000

Ctrl -Pi

Nucleosome occupancy

Nucleosome occupancy

155

160

Ctrl -Pi

150 140 130 120 110

100 -500 0 500 1000 -1000 -500 TSS 0 500 1000 1500 2000 2500 TTS +500 +1000 Distance from TTS (bp) Relative distance (bp) Figure S2 Nucleosome patterns across the transcription termination site and gene body of rice genes. Regions 1,000 bp upstream and downstream of the transcription termination site (TTS or 3’ boundary of the element), and gene body (GB, from TSS (5’ boundary) to TTS (3’ boundary) of a gene) were used to plot MNase-seq density under control conditions (A and B) and control and –Pi (C and D). (A) MNase-seq density for all rice genes across the TTS under control conditions. (B) MNase-seq density for all rice genes across the GB under control conditions. (C) MNase-seq density of PCG across the TTS from 24-hour control and –Pi rice shoots. (D) MNase-seq density of PCG across the GB from 24-hour control and –Pi rice shoots.