catalysts
Review Review
Artificial Biocatalytic Linear Cascades to Access Artificial Biocatalytic Linear Cascades to Access Hydroxy Acids, Lactones, and α- and β-Amino Acids Hydroxy Acids, Lactones, and α‐ and β‐Amino Acids 2 and Wolfgang Kroutil 1,2, ID 2 and Wolfgang Kroutil 1,2,* * , Stefan Velikogne Joerg H. Schrittwieser 11, Stefan Velikogne Joerg H. Schrittwieser
ID
1
Institute of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Institute of Chemistry, Organic and Bioorganic Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, Heinrichstrasse 28, 8010 Graz, Austria;
[email protected] Graz, Heinrichstrasse 28, 8010 Graz, Austria; joerg.schrittwieser@uni‐graz.at 2 ACIB GmbH, c/o Department of Chemistry, University of Graz, Heinrichstrasse 28, 8010 Graz, Austria; 2 ACIB GmbH, c/o Department of Chemistry, University of Graz, Heinrichstrasse 28, 8010 Graz, Austria;
[email protected] [email protected]‐graz.at ** Correspondence: Wolfgang.Kroutil@uni‐graz.at; Tel.: +43‐316‐380‐5350 Correspondence:
[email protected]; Tel.: +43-316-380-5350 1
Received: 25 April 2018; Accepted: 8 May 2018; Published: 14 May 2018 Received: 25 April 2018; Accepted: 8 May 2018; Published: 14 May 2018
Abstract: α‐, β‐, and ω‐Hydroxy acids, amino acids, and lactones represent common building blocks Abstract: α-, β-, and ω-Hydroxy acids, amino acids, and lactones represent common building blocks and intermediates various target molecules. This review summarizes artificial published cascades and intermediates forfor various target molecules. This review summarizes artificial cascades published during the last 10 years leading to these products. Renewables as well as compounds during the last 10 years leading to these products. Renewables as well as compounds originating originating from fossil resources have been employed as starting material. The review provides an from fossil resources have been employed as starting material. The review provides an inspiration inspiration for new cascade and basis may to be design the basis to design variations of these cascades for new cascade designs and designs may be the variations of these cascades starting either starting either from alternative substrates or extending them to even more sophisticated products. from alternative substrates or extending them to even more sophisticated products. Keywords: cascade; biocatalysis; biotransformations; hydroxy acids; lactones and α‐ and β‐amino acids Keywords: cascade; biocatalysis; biotransformations; hydroxy acids; lactones and α- and β-amino acids
1. Introduction 1. Introduction Artificial cascades involving biocatalysts have received increased attention recently [1–29], also Artificial cascades involving biocatalysts have received increased attention recently [1–29], also in in combination of enzymes with metal catalysis [30–37]. In this context, a cascade is defined as the combination of enzymes with metal catalysis [30–37]. In this context, a cascade is defined as the combination of a minimum of two chemical reaction steps in a single reaction vessel without isolation combination of a minimum of two chemical reaction steps in a single reaction vessel without isolation of the intermediate(s) [38]. Linear cascade means that the product of one step in the cascade is the of the intermediate(s) [38]. Linear cascade means that the product of one step in the cascade is the substrate of a second subsequent step (Scheme 1) [1ac]. substrate of a second subsequent step (Scheme 1) [1ac].
Scheme 1. Linear cascade comprising n steps (n ≥ 2). Scheme 1. Linear cascade comprising n steps (n ≥ 2).
In this review, the focus is on biocatalytic cascades of the last 10 years, whereby all steps are In this review, the focus is on biocatalytic cascades of the last 10 years, whereby all steps are performed simultaneously, leading to hydroxy acids, lactones, and α‐ and β‐amino carboxylic acids performed simultaneously, leading to hydroxy acids, lactones, and α- and β-amino carboxylic acids as as final products. final products. 2. Hydroxy Acids 2. Hydroxy Acids Hydroxy acids play an important role in chemical industry: α‐Hydroxycarboxylic acids are part Hydroxy acids play an important role in chemical industry: α-Hydroxycarboxylic acids are of numerous natural products, such as as depsipeptides or oraeruginosins, various part of numerous natural products, such depsipeptides aeruginosins,as aswell wellas as of of various Catalysts 2018, 8, x; doi: FOR PEER REVIEW Catalysts 2018, 8, 205; doi:10.3390/catal8050205
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pharmaceuticals [39–41]. Their ω‐hydroxy counterparts, on other the hand, other are hand, are in the pharmaceuticals [39–41]. Their ω-hydroxy counterparts, on the used in used the production production of a variety of chemical products and intermediates such as polyesters, resins, lubricants, of a variety of chemical products and intermediates such as polyesters, resins, lubricants, plasticizers, plasticizers, and perfumes [42,43]. Hence, efficient synthetic entries to these compounds are highly and perfumes [42,43]. Hence, efficient synthetic entries to these compounds are highly desired. desired.
2.1. Preparation of ω-Hydroxycarboxylic Acids from Fatty Acids 2.1. Preparation of ω‐Hydroxycarboxylic Acids from Fatty Acids The biocatalytic synthesis of ω-hydroxycarboxylic acids has recently been realised starting from The biocatalytic synthesis of ω‐hydroxycarboxylic acids has recently been realised starting from ricinoleic acid or oleic acid in a three- or four-step cascade (Scheme 1) [44]. ricinoleic acid or oleic acid in a three‐ or four‐step cascade (Scheme 1) [44]. Biotransformations producing the desired hydroxy acids were performed with a conversion Biotransformations producing the desired hydroxy acids were performed with a conversion ranging from 60% to 70% at 1 mM substrate concentration employing E. coli cells co-expressing ranging from 60% to 70% at 1 mM substrate concentration employing E. coli cells co‐expressing all allthe necessary enzymes. Several other fatty acids, such as 5‐hydroxydecanoic acid, linoleic acid, and the necessary enzymes. Several other fatty acids, such as 5-hydroxydecanoic acid, linoleic acid, and lesquerolic acid, were transformed by this cascade leading to a similar range of conversion. lesquerolic acid, were transformed by this cascade leading to a similar range of conversion. Treating Treating 5 gram per litre olive oil with lipase generated a product mixture containing 11.3 mM oleic 5 gram per litre olive oil with lipase generated a product mixture containing 11.3 mM oleic acid and acid and 1.2 mM palmitic acid. The subsequent biotransformation was performed as outlined in 1.2 mM palmitic acid. The subsequent biotransformation was performed as outlined in Scheme 2B, Scheme 2B, yielding 9-hydroxynonanoic acid (10) with 60% conversion. yielding 9‐hydroxynonanoic acid (10) with 60% conversion.
Scheme 2. Cascades to ω‐hydroxycarboxylic acids. (A) Biotransformation starting from ricinoleic acid Scheme 2. Cascades to ω-hydroxycarboxylic acids. (A) Biotransformation starting from ricinoleic (1) to yield n‐heptanoic acid (5) and 11‐hydroxyundec‐9‐enoic acid (4); (B) Four‐step cascade starting acid (1) to yield n-heptanoic acid (5) and 11-hydroxyundec-9-enoic acid (4); (B) Four-step cascade from oleic producing n‐nonanoic acid (11) acid and 9‐hydroxynonanoic acid (10). Enzyme starting fromacid oleic(6) acid (6) producing n-nonanoic (11) and 9-hydroxynonanoic acid (10). abbreviations: ADH, alcohol dehydrogenase; BVMO, Baeyer–Villiger monooxygenase. Enzyme abbreviations: ADH, alcohol dehydrogenase; BVMO, Baeyer–Villiger monooxygenase.
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In In a a follow-up conditionsand andexpression expressionprotocol protocol were follow‐up study study [45], [45], the the biotransformation biotransformation conditions were optimised for the preparation of 11-hydroxyundec-9-enoic acid (4), which may have potential optimised for the preparation of 11‐hydroxyundec‐9‐enoic acid (4), which may have potential as an as anantifungal antifungalagent agent[46]. [46].Employing Employingincreased increased concentrations ricinoleic acid mM) and the concentrations of of ricinoleic acid (1; (1; 10 10 mM) and the biocatalyst (>10 g cell dry-weight per litre), a final concentration of 4.0 g/L 11-hydroxyundec-9-enoic biocatalyst (>10 g cell dry‐weight per litre), a final concentration of 4.0 g/L 11‐hydroxyundec‐9‐enoic acid (4) was achieved. acid (4) was achieved. 2.2.2.2. Conversion of α‐Amino Acids into α‐Hydroxy Acids Conversion of α-Amino Acids into α-Hydroxy Acids The synthesis of (R)acids has beenhas described starting from the corresponding The synthesis of and (R)‐ (S)-α-hydroxy and (S)‐α‐hydroxy acids been described starting from the L -amino acids, applying anacids, L -amino acid deaminase (L-AAD) Proteus(Lmyxofaciens, followed corresponding L‐amino applying an L‐amino acid from deaminase ‐AAD) from Proteus by themyxofaciens, followed by the asymmetric reduction mediated by either asymmetric reduction mediated by either L- or D-hydroxyisocaproate dehydrogenases (HicDHs), L‐ or D‐hydroxyisocaproate dehydrogenases (HicDHs), derived from Lactobacillus confusus DSM 20196 and Lactobacillus paracasei derived from Lactobacillus confusus DSM 20196 and Lactobacillus paracasei DSM 20008, respectively DSM 20008, respectively (Scheme 3) [47]. (Scheme 3) [47].
Scheme Transformation L‐amino acids the corresponding α‐hydroxy in a two‐step Scheme 3. 3. Transformation of Lof -amino acids intointo the corresponding α-hydroxy acidsacids in a two-step cascade. cascade. Enzyme abbreviations: L‐AAD, ‐amino acid HicDH, deaminase; HicDH, α‐hydroxyisocaproate Enzyme abbreviations: L-AAD, L-amino acidLdeaminase; α-hydroxyisocaproate dehydrogenase. dehydrogenase.
The transformation of all tested amino acids allowed conversions of 97–99% (73–85% isolated The transformation of all tested amino acids allowed conversions of 97–99% (73–85% isolated yield) within 7 h, even with high substrate loadings (up to 200 mM; see Table 1), furnishing the yield) within 7 h, even with high substrate loadings (up to 200 mM; see Table 1), furnishing the α‐ α-hydroxy acids 14 in optically pure form (>99% ee). hydroxy acids 14 in optically pure form (>99% ee). Table 1. Transformation of α-amino acids 12 into α-hydroxy acids 14 via a two-step cascade (Scheme 3) a . Table 1. Transformation of α‐amino acids 12 into α‐hydroxy acids 14 via a two‐step cascade (Scheme 3) a. b (%) b (%)ee (%) ee (%) Substrate (mM) Substrate Conc. (mM) HicDH Conv. Substrate (mM) Substrate Conc. (mM) HicDH Conv. 12a L‐Hic >99 (81) >99 (S) 100 12a 100 L -Hic >99 (81) >99 (S) 12a D‐Hic >99 (84) >99 (R) 100 12a 100 D -Hic >99 (84) >99 (R) 12b L‐Hic >99 (83) >99 (S) 50 12b 50 L -Hic >99 (83) >99 (S) 12b D‐Hic >99 (83) >99 (R) 50 12b 50 D -Hic >99 (83) >99 (R) 12c L‐Hic >99 (81) 12c 100 100 L -Hic >99 (81) >99 (S) >99 (S) 12c D‐Hic >99 (85) 100 12c 100 D -Hic >99 (85) >99 (R) >99 (R) 12d L ‐Hic >99 (79) 100 12d 100 L -Hic >99 (79) >99 (S) >99 (S) 12d D ‐Hic >99 (82) 100 12d 100 D -Hic >99 (82) >99 (R) >99 (R) 12e ‐Hic >99 (77) 12e 200 200 LL-Hic >99 (77) >99 (S) >99 (S) 12e ‐Hic >99 (73) 12e 200 200 DD-Hic >99 (73) >99 (R) >99 (R) a Reaction conditions: Substrate L‐12a–e (50–200 mM), HCO2NH4 (3 eq.), NAD+ (1 mM), FDH (formate a Reaction conditions: Substrate L-12a–e (50–200 mM), HCO2 NH4 (3 eq.), NAD+ (1 mM), FDH (formate dehydrogenase, 42 U/mmol), L-AAD (15–30 U/mmol), L-Hic (132 U/mmol) or D-Hic (96DU/mmol), 1 bar O2 , 21 ◦ C, dehydrogenase, 42 U/mmol), L‐AAD (15–30 U/mmol), L‐Hic (132 U/mmol) or ‐Hic (96 U/mmol), 1 b 7 h.bar O Isolated yield in bparentheses. 2, 21 °C, 7 h. Isolated yield in parentheses.
L‐Tyrosine (12f) was also transformed at high substrate concentrations (200 mM) and on a 100 L-Tyrosine (12f) was also transformed at high substrate concentrations (200 mM) and on a 100 mg
mg toscale to afford the α‐hydroxy acid (S)‐14f 80% isolated yield and ee >99% ee (Scheme The scale afford the α-hydroxy acid (S)-14f in 80%in isolated yield and >99% (Scheme 4). The4). product 14f is an important building block for various active biologically active such compounds, such as 14fproduct is an important building block for various biologically compounds, as Saroglitazar (15), Saroglitazar (15), which is used as a treatment for diabetes Type II [48]. which is used as a treatment for diabetes Type II [48].
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Scheme 4. Scheme Multi-enzyme cascade cascade synthesis synthesis of of (S)‐14f, (S)-14f, a a building building block for the preparation of the Scheme 4. 4. Multi‐enzyme Multi‐enzyme cascade synthesis of (S)‐14f, a building block block for for the the preparation preparation of of the the L ‐AAD, L ‐amino acid deaminase; HicDH, antidiabetic drug Saroglitazar (15). Enzyme abbreviations: antidiabetic drug Saroglitazar (15). Enzyme abbreviations: LL-AAD, -amino acid deaminase; HicDH, ‐AAD, LL‐amino acid deaminase; HicDH, antidiabetic drug Saroglitazar (15). Enzyme abbreviations: α‐hydroxyisocaproate dehydrogenase; FDH, formate dehydrogenase. α-hydroxyisocaproate dehydrogenase; FDH, formate dehydrogenase. α‐hydroxyisocaproate dehydrogenase; FDH, formate dehydrogenase.
In a subsequent study, an extended version of the cascade was published to access α‐hydroxy In a subsequent study, an extended version of the cascade was published to access α-hydroxy In a subsequent study, an extended version of the cascade was published to access α‐hydroxy acids starting from phenol derivatives and pyruvate (Scheme 5) [49]. acids starting from phenol derivatives and pyruvate (Scheme 5) [49]. acids starting from phenol derivatives and pyruvate (Scheme 5) [49].
Scheme Biocatalytic cascade for the of acids 18 starting from phenol Scheme 5.5. 5. Biocatalytic Biocatalytic cascade for synthesis the synthesis synthesis of α‐hydroxy α‐hydroxy 18 from starting from phenol Scheme cascade for the of α-hydroxy acids 18 acids starting phenol derivatives L‐tyrosine phenol lyase; L‐AAD, L‐amino derivatives 16 and pyruvate. Enzyme abbreviations: TPL, L‐tyrosine phenol lyase; ‐AAD, L‐amino derivatives 16 and pyruvate. Enzyme abbreviations: TPL, 16 and pyruvate. Enzyme abbreviations: TPL, L-tyrosine phenol lyase; L-AAD, L-aminoLacid deaminase; acid deaminase; HicDH, α‐hydroxyisocaproate dehydrogenase. acid deaminase; HicDH, α‐hydroxyisocaproate dehydrogenase. HicDH, α-hydroxyisocaproate dehydrogenase.
As an additional step in this new reaction setup, the amino acid is formed within the cascade As an additional step in this new reaction setup, the amino acid is formed within the cascade As an additional step in this new reaction setup, the amino acid is formed within the cascade employing a tyrosine phenol lyase (TPL) from Citrobacter freundii, which performs a C–C coupling employing a tyrosine phenol lyase (TPL) from Citrobacter freundii, which performs a C–C coupling employing a tyrosine phenol lyase (TPL) from Citrobacter freundii, which performs a C–C coupling between substituted phenols 16 and pyruvate. The oxidative deamination and subsequent reduction between substituted phenols 16 and pyruvate. The oxidative deamination and subsequent reduction between substituted phenols 16 and pyruvate. The oxidative deamination and subsequent reduction are done by the same enzymes as described before. However, by introducing the additional TPL into are done by the same enzymes as described before. However, by introducing the additional TPL into are done by the same enzymes as described before. However, by introducing the additional TPL into the cascade, it has to be performed in sequential mode since small amounts of product 18 cause an the cascade, it has to be performed in sequential mode since small amounts of product 18 cause an the cascade, it has to be performed in sequential mode since small amounts of product 18 cause an inhibition of step one. inhibition of step one. inhibition of step one. The H) range mM The model model compound compound phenol (16a, R = phenol (16a, R = H) was was converted converted in a in a range of 23–46 of 23–46 mM with with high high The model compound phenol (16a, R = H) was converted in a range of 23–46 mM with high conversions (93–97%) and ee (>99%) for both enantiomers. Related phenol substrates were accepted conversions (93–97%) and ee (>99%) for both enantiomers. Related phenol substrates were accepted conversions (93–97%) and ee (>99%) for both enantiomers. Related phenol substrates were accepted at at concentrations up to 92 mM reaching conversions up to >99% and perfect ee (>97% by HPLC; Table at concentrations up to 92 mM reaching conversions up to >99% and perfect ee (>97% by HPLC; Table concentrations up to 92 mM reaching conversions up to >99% and perfect ee (>97% by HPLC; Table 2). 2). A preparative reaction transforming 56.6 mg of substrate 16a afforded the optically pure hydroxy 2). A preparative reaction transforming 56.6 mg of substrate 16a afforded the optically pure hydroxy A preparative reaction transforming 56.6 mg of substrate 16a afforded the optically pure hydroxy acid acid (S)‐18a with 97% conversion in 77% isolated yield (ee > 97%). acid (S)‐18a with 97% conversion in 77% isolated yield (ee > 97%). (S)-18a with 97% conversion in 77% isolated yield (ee > 97%).
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Table 2. Results of cascade transforming phenols to p‐hydroxyphenyl lactic acids 18 (Scheme 5) a. b (%) Substrate (mM) Substrate Conc. (mM) HicDH Conv. Table 2. Results of cascade transforming phenols to p-hydroxyphenyl lactic acids ee (%) 18 (Scheme 5) a . 16a L‐HicDH 97 (77) >97 (S) 46 b (%) >97 (R) 16a D‐HicDH 97 (73) 46 (mM) Substrate (mM) Substrate Conc. HicDH ee (%) Conv. 16b L‐HicDH 92 (60) >97 (S) 46 16a 46 L -HicDH 97 (77) >97 (S) 16b D‐HicDH 92 (58) >97 (R) 46 16a 46 D -HicDH 97 (73) >97 (R) L‐HicDH 96 (77) >97 (S) 16b 16c 46 69 L -HicDH 92 (60) >97 (S) ‐HicDH 96 (75) >97 (R) 16b 16c 46 69 DD -HicDH 92 (58) >97 (R) ‐HicDH >99 (80) >97 (S) 16c 16d 69 92 LL -HicDH 96 (77) >97 (S) ‐HicDH >99 (77) >97 (R) 16c 16d 69 92 DD -HicDH 96 (75) >97 (R) 16d 16e 92 92 LL -HicDH >99 (80) >97 (S) ‐HicDH 93 (81) >97 (S) 16d 16e 92 92 DD -HicDH >99 (77) >97 (R) ‐HicDH 95 (80) >97 (R) 16e 16f 92 23 LL -HicDH 93 (81) >97 (S) ‐HicDH 83 (63) >97 (S) 16e 16f 92 23 D -HicDH 95 (80) >97 D‐HicDH 85 (63) 96 (R) (R) 16f 23 L -HicDH 83 (63) >97 (S) 16g L‐HicDH 96 (80) >97 (S) 46 16f 23 D -HicDH 85 (63) 96 (R) 16g D‐HicDH 95 (85) >97 (R) 46 16g 46 L -HicDH 96 (80) >97 (S) a Reaction conditions: Substrate 16 (23–92 mM), pyruvate (2 eq.), NH4Cl (4 eq.), NAD+ (1 mM), 16g 46 D -HicDH 95 (85) >97 (R) 4HCOO (3 eq.), TPL (41 U/mmol), L‐AAD (40 U/mmol), D‐HicDH (114 U/mmol) or ‐HicDH (68 aNH Reaction conditions: Substrate 16 (23–92 mM), pyruvate (2 eq.), NH4 Cl (4 eq.), NAD+ (1 mM), NH4LHCOO (3 eq.), TPL (41 U/mmol), L -AAD (40 U/mmol), D -HicDH (114 U/mmol) or L-HicDH (68oxidative U/mmol), deamination FDH (76 U/mmol), U/mmol), FDH (76 U/mmol), 21 °C, 24 h for C–C coupling, 3 h for and ◦ C, 24 h for C–C coupling, 3 h for oxidative deamination and reduction. b Isolated yields in parentheses. 21 b Isolated yields in parentheses. reduction.
Starting from L‐phenylalanine, (S)‐mandelic acid was produced via a six‐step cascade involving -phenylalanine, (S)-mandelic acid was produced via a six-step cascade involving Starting from ammonia decarboxylation, epoxidation, epoxide hydrolysis, and oxidation of the primary ammonia elimination, elimination, decarboxylation, epoxidation, epoxide hydrolysis, and oxidation of the alcohol to the carboxylic acid (Scheme 6) [50]. Performing the reaction with 120 mM of L-phenylalanine primary alcohol to the carboxylic acid (Scheme 6) [50]. Performing the reaction with 120 mM of L‐ to (S)-mandelic acid with E. coli cells co-expressing all enzymes in a single strain afforded 83% phenylalanine to (S)‐mandelic acid with E. coli cells co‐expressing all enzymes in a single strain conversion within 10 h and 92% conversion within 24 h and a perfect ee of 99%. afforded 83% conversion within 10 h and 92% conversion within 24 h and a perfect ee of 99%.
Scheme 6. Cascade transforming Scheme 6. Cascade transforming LL‐phenylalanine to (S)‐mandelic acid. Enzyme abbreviations: PAL, -phenylalanine to (S)-mandelic acid. Enzyme abbreviations: PAL, phenylalanine ammonia lyase; PAD, phenylacrylic acid decarboxylase; SMO, styrene phenylalanine ammonia lyase; PAD, phenylacrylic acid decarboxylase; SMO, styrene monooxygenase; monooxygenase; EH, epoxide hydrolase; ADH, FAD‐dependent alcohol dehydrogenase AlkJ from EH, epoxide hydrolase; ADH, FAD-dependent alcohol dehydrogenase AlkJ from Pseudomonas putida; Pseudomonas putida; AlDH, aldehyde dehydrogenase. AlDH, aldehyde dehydrogenase.
2.3. Deracemization of α‐Hydroxy Acids Following previous reports on deracemization [1n‐t], selected α‐hydroxy acids were deracemized in an enantioselective oxidation–stereoselective reduction sequence (Scheme 7, Table 3)
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2.3. Deracemization of α-Hydroxy Acids Following previous reports on deracemization [1n-t], selected α-hydroxy acids were deracemized Catalysts 2018, 8, x FOR PEER REVIEW 6 of 23 in an enantioselective oxidation–stereoselective reduction sequence (Scheme 7, Table 3) [51]. [51]. was Oxidation was using achieved using a flavin‐mononucleotide‐dependent (S)‐2‐hydroxy acid Oxidation achieved a flavin-mononucleotide-dependent (S)-2-hydroxy acid dehydrogenase dehydrogenase [(S)‐2‐HADH] from Pseudomonas aeruginosa. For the asymmetric reduction of [(S)-2-HADH] from Pseudomonas aeruginosa. For the asymmetric reduction of the intermediatethe α-keto intermediate α‐keto acid, an NADH‐dependent ketoreductase from Leuconostoc mesenteroides, was acid, an NADH-dependent ketoreductase from Leuconostoc mesenteroides, was employed, whereby the employed, whereby the cofactor was regenerated via GDH (glucose dehydrogenase) from cofactor was regenerated via GDH (glucose dehydrogenase) from Exiguobacterium sibiricum. For the Exiguobacterium sibiricum. For the substrates investigated at 20 mM concentration, the ee values substrates investigated at 20 mM concentration, the ee values obtained ranged between 60% and >99%, obtained ranged between 60% and >99%, whereby in most cases optically pure product was obtained whereby in most cases optically pure product was obtained with up to 98% conversion. with up to 98% conversion.
Scheme 7. Deracemization of α‐hydroxy acids by enantioselective oxidation and stereoselective Scheme 7. Deracemization of α-hydroxy acids by enantioselective oxidation and stereoselective reduction. Enzyme abbreviations: (S)‐2‐HADH, (S)‐2‐hydroxy acid dehydrogenase; (R)‐2‐KAR, (R)‐ reduction. Enzyme abbreviations: (S)-2-HADH, (S)-2-hydroxy acid dehydrogenase; (R)-2-KAR, 2‐keto acid reductase.
(R)-2-keto acid reductase.
Table 3. Deracemization of α‐hydroxy acids by enantioselective oxidation and stereoselective
Tablereduction (Scheme 7). 3. Deracemization of α-hydroxy acids by enantioselective oxidation and stereoselective reduction (Scheme 7). Substrate rac‐26 Reaction Time (h) Conv. (%) ee of (R)‐26 (%) a 4 95 >99 Substrate rac-26 b Reaction Time Conv. ee of (R)-26 (%) 6 (h) 95 (%) >99 c 6 93 95 >99 a 4 >99 d 4 95 95 >99 b 6 >99 e 4 96 93 >99 c 6 >99 f 4 97 95 >99 d 4 >99 g 4 98 96 >99 e 4 >99 h 2 95 97 >99 f 4 >99 i 4 96 98 >99 g 4 >99 j 2 95 95 >99 h 2 >99 k 4 96 96 >99 i 4 >99 l 2 96 95 >99 j 2 >99 m 4 95 96 >99 k 4 >99 n 82 6 36 96 l 2 >99 o 6 35 95 72 m 4 >99 p 6 60 36 >99 n 6 82 q 6 43 35 >99 o 6 72 r 6 77 60 63 p 6 >99 s 6 58 43 60 q 6 >99
r 2.4. Styrenes to α‐Hydroxy Acids s
6 6
77 58
63 60
An alternative route to α‐hydroxycarboxylic acids has recently been developed as a modular multi‐enzyme system Acids for the functionalisation of styrene derivatives (Scheme 8) [52]. In this 2.4. Styrenes to α-Hydroxy approach, aryl‐substituted styrenes 28 were converted into vicinal diols (S)‐30 using the enzymes of An alternative route to α-hydroxycarboxylic acids has recently been developed as a modular Module 1, styrene monooxygenase and epoxide hydrolase. Selective oxidation of the primary alcohol
multi-enzyme system for the functionalisation of styrene derivatives (Scheme 8) [52]. In this
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approach, aryl-substituted styrenes 28 were converted into vicinal diols (S)-30 using the enzymes Catalysts 2018, 8, x FOR PEER REVIEW 7 of 23 of Module 1, styrene monooxygenase and epoxide hydrolase. Selective oxidation of the primary Catalysts 2018, 8, x FOR PEER REVIEW 7 of 23 alcohol moiety to the carboxylic acid was then realised by a second bi-enzymatic module, moiety to the carboxylic acid was then realised by a second bi‐enzymatic module, comprising the comprising the membrane-associated alcohol dehydrogenase from Pseudomonas putida well membrane‐associated alcohol dehydrogenase AlkJ from AlkJ Pseudomonas putida as well as as moiety to the carboxylic acid was then realised by a second bi‐enzymatic module, comprising the as membrane‐associated phenylacetaldehyde dehydrogenase from E. coli. Eleven different mandelic acid derivatives (S)-32 phenylacetaldehyde dehydrogenase from E. coli. Eleven different mandelic acid derivatives (S)‐32 alcohol dehydrogenase AlkJ from Pseudomonas putida as well as were thus produced with 69–99% overall conversion and ee values mandelic ranging from to >99%. were thus produced with 69–99% overall conversion and ee values ranging from 96% to >99%. phenylacetaldehyde dehydrogenase from E. coli. Eleven different acid 96% derivatives (S)‐32 were thus produced with 69–99% overall conversion and ee values ranging from 96% to >99%.
Scheme 8. Modularised multi‐enzyme system for the production of 1,2‐diols (S)‐30 or α‐hydroxy
Scheme 8. Modularised multi-enzyme system for the production of 1,2-diols (S)-30 or α-hydroxy acids acids (S)‐32 from styrene derivatives 28. Abbreviations: SMO, styrene monooxygenase; EH, epoxide Scheme Modularised multi‐enzyme system for the styrene production of 1,2‐diols EH, (S)‐30 or α‐hydroxy (S)-32 from 8. styrene derivatives 28. Abbreviations: SMO, monooxygenase; epoxide hydrolase; hydrolase; ADH, FAD‐dependent alcohol dehydrogenase AlkJ from Pseudomonas putida; AlDH, acids (S)‐32 from styrene derivatives 28. Abbreviations: SMO, styrene monooxygenase; EH, epoxide ADH, FAD-dependent alcohol dehydrogenase AlkJ from Pseudomonas putida; AlDH, aldehyde aldehyde dehydrogenase; Q, ubiquinone. hydrolase; ADH, FAD‐dependent alcohol dehydrogenase AlkJ from Pseudomonas putida; AlDH, dehydrogenase; Q, ubiquinone. aldehyde dehydrogenase; Q, ubiquinone.
2.5. Access to α β‐Hydroxy Dicarboxylic Acid Derivative Ethyl (R)‐3‐Hydroxyglutarate 2.5. Access to α β-Hydroxy Dicarboxylic Acid Derivative Ethyl (R)-3-Hydroxyglutarate 2.5. Access to α β‐Hydroxy Dicarboxylic Acid Derivative Ethyl (R)‐3‐Hydroxyglutarate The biocatalytic synthesis of ethyl (R)‐3‐hydroxyglutarate (36), a key intermediate in the The biocatalytic synthesis of ethyl (R)-3-hydroxyglutarate (36), a key intermediate in the preparation of the cholesterol‐lowering drug rosuvastatin, was achieved in a three‐step cascade with The biocatalytic synthesis of ethyl (R)‐3‐hydroxyglutarate (36), a key intermediate in the preparation of the cholesterol-lowering drug rosuvastatin, inas a starting three-step cascade two enzymes [53]. Ethyl (S)‐4‐chloro‐3‐hydroxybutyrate (33) was was achieved employed material, preparation of the cholesterol‐lowering drug rosuvastatin, was achieved in a three‐step cascade with with two enzymes [53]. Ethyl (S)-4-chloro-3-hydroxybutyrate (33) was employed as starting material, which was converted to the corresponding epoxide by a (33) halohydrin dehalogenase (HHDH) from two enzymes [53]. Ethyl (S)‐4‐chloro‐3‐hydroxybutyrate was employed as starting material, which was converted to the corresponding epoxide by a halohydrin dehalogenase (HHDH) from Agrobacterium radiobacter AD1, followed by a ring opening and subsequent hydrolysis to the product, which was converted to the corresponding epoxide by a halohydrin dehalogenase (HHDH) from Agrobacterium radiobacter AD1, followed by a ring opening and subsequent hydrolysis to the product, using a nitrilase from Arabidopsis thaliana (Scheme 9). Agrobacterium radiobacter AD1, followed by a ring opening and subsequent hydrolysis to the product, using a nitrilase from Arabidopsis thaliana (Scheme 9). using a nitrilase from Arabidopsis thaliana (Scheme 9).
Scheme 9. Biocatalytic transformation of ethyl (S)‐4‐chloro‐3‐hydroxybutyrate (33) into the pharmacologically important ethyl (R)‐3‐hydroxyglutarate (36). Enzyme abbreviation: HHDH, Scheme Biocatalytic transformation of (33) Scheme 9. 9. Biocatalytic transformation of ethyl ethyl (S)‐4‐chloro‐3‐hydroxybutyrate (S)-4-chloro-3-hydroxybutyrate (33)into intothe the halohydrin dehalogenase. pharmacologically important ethyl (R)‐3‐hydroxyglutarate (36). Enzyme abbreviation: HHDH, pharmacologically important ethyl (R)-3-hydroxyglutarate (36). Enzyme abbreviation: HHDH, halohydrin dehalogenase. halohydrin dehalogenase.
Using E. coli cells co‐expressing the two required enzymes, up to 300 mM substrate were transformed within 1.5 h. However, at a substrate loading of 600 mM unfortunately only about 20% Using E. coli cells co‐expressing the two required enzymes, up to 300 mM substrate were Using E. coli cells co-expressing the two required enzymes, up to 300 mM substrate were of the target hydroxy acid was detected after 5 h reaction time while intermediate 35 accumulated. transformed within 1.5 h. However, at a substrate loading of 600 mM unfortunately only about 20% transformed within 1.5 h. However, at a substrate loading of 600 mM unfortunately only about Studying the inhibitory effect of the substrate 33 on the nitrilase, it was shown that above 300 mM a of the target hydroxy acid was detected after 5 h reaction time while intermediate 35 accumulated. significant decrease in activity was observed. In order to access high product titres, the cascade was Studying the inhibitory effect of the substrate 33 on the nitrilase, it was shown that above 300 mM a significant decrease in activity was observed. In order to access high product titres, the cascade was
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20% of the target hydroxy acid was Catalysts 2018, 8, x FOR PEER REVIEW detected after 5 h reaction time while intermediate 35 accumulated. 8 of 23 Studying the inhibitory effect of the substrate 33 on the nitrilase, it was shown that above 300 mM aperformed in a fed‐batch mode; thus, 300 mM of substrate was added twice over a period of 2 h. By significant decrease in activity was observed. In order to access high product titres, the cascade using this approach, the reaction went to completion within 6 h. Adding 300 mM substrate for a third was performed in a fed-batch mode; thus, 300 mM of substrate was added twice over a period of 2 h. time, 35% of intermediate 35 remained in the reaction mixture while 33 was completely consumed. By using this approach, the reaction went to completion within 6 h. Adding 300 mM substrate for a Poorly balanced activity levels of the two co‐expressed enzymes were identified as the reason for this third time, 35% of intermediate 35 remained in the reaction mixture while 33 was completely consumed. accumulation of activity the reaction intermediate as the nitrilase was expressed in assignificantly lower Poorly balanced levels of the two co-expressed enzymes were identified the reason for this amounts than the HHDH. Consequently, whole‐cell preparations expressing the enzymes accumulation of the reaction intermediate as the nitrilase was expressed in significantly lower amounts individually were used and the ratio of preparations the amount expressing of different the cells was adjusted to obtain than the HHDH. Consequently, whole-cell enzymes individually were comparable activity levels for the two enzymes. By employing this setup, 900 mM of compound 33 used and the ratio of the amount of different cells was adjusted to obtain comparable activity levels for were completely converted into the final product within 6 h, and (R)‐36 was isolated in 84% yield. the two enzymes. By employing this setup, 900 mM of compound 33 were completely converted into the final product within 6 h, and (R)-36 was isolated in 84% yield. 3. α‐ and β‐Amino Acids 3. α- and β-Amino Acids Natural and non‐natural amino acids and their derivatives are pivotal building blocks for Natural and non-natural amino drugs, acids and their derivatives are pivotal building blocks agrochemicals, bioactive polypeptide pharmaceuticals, and polymers [54–57]. Hence, the for agrochemicals, bioactive polypeptide drugs, pharmaceuticals, and polymers [54–57]. Hence, efficient synthesis of these compounds has received tremendous interest the efficient synthesis these compounds has received interest The synthesis of of the non‐natural α‐amino acid L‐tremendous phenylglycine and its derivatives has been The synthesis of the non-natural α-amino acid L-phenylglycine and its derivatives has been described using a three‐enzyme cascade, starting from racemic mandelic acid. While in an older study described usingacid a three-enzyme cascade, starting racemic mandelic acid. have Whilebeen in aninvestigated older study only mandelic was transformed [58], other from mandelic acid derivatives only was [58], other mandelic acid derivatives been investigated more more mandelic recently acid [59]. In transformed this redox‐neutral cascade that proceeds via have ‘hydrogen borrowing’, an recently [59]. In this redox-neutral cascade that proceeds via ‘hydrogen borrowing’, an engineered engineered mandelate racemase (MRM) from Pseudomonas putida, a D‐mandelate dehydrogenase ( D‐ mandelate racemase (MRM) from Pseudomonas putida, a D -mandelate dehydrogenase ( D -MDH) from MDH) from Lactobacillus brevis, and an L‐leucine dehydrogenase (LeuDH) from Exiguobacterium Lactobacillus brevis, and an L-leucine dehydrogenase (LeuDH) from Exiguobacterium sibiricum were sibiricum were selected to produce L‐phenyl glycine derivatives 38 in a one‐pot simultaneous fashion selected to produce L-phenyl glycine derivatives 38 in a one-pot simultaneous fashion (Scheme 10). (Scheme 10).
Scheme 10. 10. Three-step Three‐step cascade cascade for for the the conversion conversion of of racemic racemic phenyllactic phenyllactic acid acid derivatives derivatives 32 32 into into Scheme D‐ optically active phenylglycine derivatives 38. Enzyme abbreviations: MRM, mandelate racemase; optically active phenylglycine derivatives 38. Enzyme abbreviations: MRM, mandelate racemase; D‐mandelate dehydrogenase; LeuDH, L‐leucine dehydrogenase. MDH, D -MDH, D -mandelate dehydrogenase; LeuDH, L -leucine dehydrogenase.
Under optimized conditions, 50 mM of substrate 32a (R = H) were transformed into the desired Under optimized conditions, 50 mM of substrate 32a (R = H) were transformed into the desired product with 97% conversion and a perfect ee of >99% after 24 h. When the substrate loading was product with 97% conversion and a perfect ee of >99% after 24 h. When the substrate loading was increased to up to 200 mM, good conversions of more than 95% were observed, whereas at even increased to up to 200 mM, good conversions of more than 95% were observed, whereas at even higher concentrations (500 mM) the conversion was reduced to 63%. To prove the applicability of this higher concentrations (500 mM) the conversion was reduced to 63%. To prove the applicability of this cascade, 30.4 g (200 mM) of rac‐mandelic acid were transformed at a 1 L scale reaction, leading to cascade, 30.4 g (200 mM) of rac-mandelic acid were transformed at a 1 L scale reaction, leading to >96% >96% conversion and an isolated product yield of 86.5%. conversion and an isolated product yield of 86.5%. Further, mandelic acid derivatives were converted to the corresponding phenylglycine products as well, showing moderate to good conversions (Table 4). Of special interest is product 38b (R = o‐ Cl), which is a building block for Clopidogrel, an antiplatelet drug.
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Further, mandelic acid derivatives were converted to the corresponding phenylglycine products as well, showing moderate to good conversions (Table 4). Of special interest is product 38b (R = o-Cl), which is a building block for Clopidogrel, an antiplatelet drug. Catalysts 2018, 8, x FOR PEER REVIEW 9 of 23 Table 4. Conversion of mandelic acid derivatives 32 into phenyl glycine derivatives 38 (Scheme 10). Table 4. Conversion of mandelic acid derivatives 32 into phenyl glycine derivatives 38 (Scheme 10).
Substrate Time (h) Substrate Time (h) Conv. (%) Conv. (%) rac‐32a (R = H) 12 97 rac-32a (R = H) 12 97 rac‐32b (R = o‐Cl) 48 49 49 rac-32b (R = o-Cl) 48 rac‐32c (R = m‐Cl) 48 90 90 rac-32c (R = m-Cl) 48 rac‐32d (R = p‐Cl) 24 95 95 rac-32d (R = p-Cl) 24 rac-32e (R = p-OH) 48 rac‐32e (R = p‐OH) 48 66 66 + (0.1 mM), MRM (5 U/mL), Reaction conditions: Substrate rac‐32 (50 mM), MgCl 2 (3 mM), NAD ‐MDH Reaction conditions: Substrate rac-32 (50 mM), MgCl2 (3 mM), NAD+ (0.1 mM), MRM (5 U/mL), D-MDH (10DU/mL), ◦ C, 12–48 h. LeuDH (10 U/mL), ammonium chloride buffer (2.0 M, pH 9.5), 30 (10 U/mL), LeuDH (10 U/mL), ammonium chloride buffer (2.0 M, pH 9.5), 30 °C, 12–48 h.
An analogous transformation of mandelic acid derivatives into phenylglycine derivatives has An analogous transformation of mandelic acid derivatives into phenylglycine derivatives has been as an system for for the been developed developed as an extension extension of of the the above-mentioned above‐mentioned modular modular multi-enzyme multi‐enzyme system the functionalisation of ring-substituted styrenes (Scheme 8) [52]. The (S)-mandelic acid derivatives 32, functionalisation of ring‐substituted styrenes (Scheme 8) [52]. The (S)‐mandelic acid derivatives 32, which ultimately derived from styrenes 28, were oxidised to oxoacids 37 using hydroxymandelate which were were ultimately derived from styrenes 28, were oxidised to oxoacids 37 using oxidase from Streptomyces coelicolor. Reductive amination of 37 by the branched-chain aminoacid hydroxymandelate oxidase from Streptomyces coelicolor. Reductive amination of 37 by the branched‐ transaminase fromtransaminase E. coli using from L -glutamate as amino donor and -glutamate dehydrogenase for L‐glutamate as Lamino donor and L‐glutamate chain aminoacid E. coli using regeneration of the latter afforded the L-phenylglycine derivatives 38 (cf. Schemes 8 and 10). The overall dehydrogenase for regeneration of the latter afforded the L‐phenylglycine derivatives 38 (cf. Schemes synthesis sequence starting from styrenes 28 involved eight enzymes (six in a linear sequence) arranged 8 and 10). The overall synthesis sequence starting from styrenes 28 involved eight enzymes (six in a in three modules (each expressed in a separate E. coli host) and provided products L-38 in 16–86% linear sequence) arranged in three modules (each expressed in a separate E. coli host) and provided overall yield and excellent optical purity (91% to >99% ee). products L‐38 in 16–86% overall yield and excellent optical purity (91% to >99% ee). -phenylglycine (38a) was also obtained in an eight-step cascade starting from L-phenylalanine L‐phenylglycine (38a) was also obtained in an eight‐step cascade starting from ‐phenylalanine (19), was transformed acid (25) as (25) as shown 6, followed further (19), which which was transformed to to (S)-mandelic (S)‐mandelic acid shown in in Scheme Scheme 6, followed by by further conversion into 38a by the sequence described in the previous paragraph [50]. Transformation of 40 mM conversion into 38a by the sequence described in the previous paragraph [50]. Transformation of 40 of (S)-of L -phenylalanine with E.with coli cells co-expressing all requiredall enzymes afforded L -phenylglycine mM (S)‐L‐phenylalanine E. coli cells co‐expressing required enzymes afforded L‐ with 85% conversion and 99% ee within 24 h. The challenging eight-step biocatalytic cascade was phenylglycine with 85% conversion and 99% ee within 24 h. The challenging eight‐step biocatalytic successfully achieved with a single recombinant strain co-expressing 10 enzymes. cascade was successfully achieved with a single recombinant strain co‐expressing 10 enzymes. To access To access LL-tyrosine ‐tyrosine and and its its derivatives derivatives substituted substituted on on the the aromatic aromatic ring, ring, aa two-step-one-pot two‐step‐one‐pot cascade was designed consisting of the P450 monooxygenase BM3 from Bacillus megaterium and a cascade was designed consisting of the P450 monooxygenase BM3 from Bacillus megaterium and a tyrosine phenyl lyase (TPL) from the microorganism Citrobacter freundii (Scheme 11) [60]. tyrosine phenyl lyase (TPL) from the microorganism Citrobacter freundii (Scheme 11) [60].
Scheme 11. Two‐step‐one‐pot Scheme 11. Two-step-one-pot biosynthesis biosynthesis of of LL‐tyrosine -tyrosine derivatives derivatives 41 41 starting starting from from arenes arenes 39. 39. Enzyme abbreviations: P450‐BM3, cytochrome P450 monooxygenase from Bacillus megaterium; TPL, Enzyme abbreviations: P450-BM3, cytochrome P450 monooxygenase from Bacillus megaterium; TPL, L‐tyrosine phenol lyase. -tyrosine phenol lyase.
Under non‐optimized conditions the model substrate 39c (R = OMe) yielded ~5% of the amino Under non-optimized conditions the model substrate 39c (R = OMe) yielded ~5% of the amino acid acid product with the majority of intermediate 40c remaining, proving steps can be product with the majority of intermediate 40c remaining, proving that both that stepsboth can be performed performed simultaneously. An inhibition study of the cascade revealed that the amount of NADP+ and of the P450 have a substantial effect on the productivity of the TPL enzyme; however, the most critical parameter was found to be the pH drop due to the release of gluconic acid during NADPH regeneration. Furthermore, small amounts (97 10 >99 68 84 >97 28 10 53 >99 >97 21 28 65 53 >97
>97 >97 >97 >97 >97 >97
a Reaction conditions: Substrate39f (R = Br) 21 >97 mM), NH4 Cl (180 mM), NADP+ 39 (5–20 mM), pyruvate (40 mM),65 D -glucose (100 (0.4 mM),a Reaction conditions: Substrate 39 (5–20 mM), pyruvate (40 mM), PLP (40 µM), P450-BM3 (2 µM), TPL (3 mg/mL), GDH (12 U/mL), catalase (1200 U/mL),4Cl (180 Tris-HCl buffer D‐glucose (100 mM), NH (100 mM,mM), NADP pH 8.0), dimethylsulfoxide (DMSO) (1% v/v), room temperature, 6 h. b Selectivity is defined as the + (0.4 mM), PLP (40 μM), P450‐BM3 (2 μM), TPL (3 mg/mL), GDH (12 U/mL), catalase percentage of L-41a–f in the final product mixture. (1200 U/mL), Tris‐HCl buffer (100 mM, pH 8.0), dimethylsulfoxide (DMSO) (1% v/v), room
temperature, 6 h. b Selectivity is defined as the percentage of L‐41a–f in the final product mixture.
Besides α-amino acids, their β-counterparts have attracted attention since they might be applied in the synthesisBesides α‐amino acids, their β‐counterparts have attracted attention since they might be applied of bioactive compounds as well as in the design of hybrid peptides [61–64]. A biosynthetic in the synthesis bioactive β-amino compounds as well in the design of hybrid peptides [61–64]. A cascade route accessing variousof aromatic acids hasas been reported using a two-step-one-pot biosynthetic route accessing various aromatic β‐amino acids has been reported using a two‐step‐one‐ starting from β-keto esters. The first step involves the hydrolysis of the ester by a lipase originating pot cascade starting from β‐keto esters. The first step involves the hydrolysis of the ester by a lipase from Candida rugosa, followed by the amination of the keto acid by an ω-transaminase (ω-TA) from originating from Candida rugosa, followed by the amination of the keto acid by an ω‐transaminase (ω‐ Polaromonas sp. JS666 (Scheme 12) [65]. TA) from Polaromonas sp. JS666 (Scheme 12) [65].
Scheme 12. Biocatalytic synthesis of β‐amino acids 44 starting from β‐keto esters 42 using a lipase and
Scheme 12. Biocatalytic synthesis of β-amino acids 44 starting from β-keto esters 42 using a lipase and a transaminase (TA). a transaminase (TA). The cascade was optimized with respect to the use of co‐solvent, amine donor, and lipase
Theconcentration; substrate 42a was converted under improved conditions with a conversion of 89% and cascade was optimized with respect to the use of co-solvent, amine donor, and lipase a perfect ee of >99% for the (R)‐enantiomer. Several further β‐keto esters were transformed into their concentration; substrate 42a was converted under improved conditions with a conversion of 89% and corresponding amino acids with conversions ranging between 26 and 99% with excellent ee values in a perfect ee of >99% for the (R)-enantiomer. Several further β-keto esters were transformed into their all cases (Table 6). corresponding amino acids with conversions ranging between 26 and 99% with excellent ee values in all cases (Table 6).
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a Table 6. Transformation of β‐keto esters 42 into β‐amino acids 44 (Scheme 12) a. 44 (Scheme 12) a .. Table 6. Transformation of β-keto esters 42 into β-amino acids Table 6. Transformation of β‐keto esters 42 into β‐amino acids 44 (Scheme 12)
Table 6. Transformation of β‐keto esters 42 into β‐amino acids 44 (Scheme 12) Substrate Conv. (%) ee (%) Substrate Substrate Conv. (%) ee (%) Conv. (%) ee (%) 42a >99% 42a 89 >99% 89 Substrate Conv. (%) ee (%) 42a 42b 89 >99% >99% 42b 96 >99% 96 42a 89 >99% 42b 42c 96 >99% >99% 42c 75 >99% 75 42b 96 >99% 42c 42d 75 73 >99% >99% 42d 73 >99% 73 75 >99% 42d >99% 42c 42e >99% 99 >99% 42e 99 73 >99% 42e 99 >99% 42d 61 >99% 42f 61 42f >99% 61 99 >99% 42f >99% 42e 47 >99% >99% 42g 47 42g >99% 47 42g 42f 61 >99% 41 >99% >99% 42h 42h 41 42h >99% 41 42g 47 >99% 26 >99% >99% 42i 42i 26 42i >99% 26 42h 41 >99% aa Reaction conditions: Substrate 42 (50 mM), (S)‐1‐phenylethylamine (150 mM), PLP (1 mM), lipase a Reaction conditions: Substrate 42 (50 mM), (S)‐1‐phenylethylamine (150 mM), PLP (1 mM), lipase Reaction conditions: Substrate 42 (50 mM), (S)-1-phenylethylamine (150 mM), PLP (1 mM), lipase 42i 26 (30 mg/mL), >99% TA (20 mg/mL), Tris-HCl buffer (100 mM,a pH 8.0), DMSO (15% v/v), 37 ◦ C, 24 h. (30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8.0), DMSO (15% v/v), 37 °C, 24 h. (30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8.0), DMSO (15% v/v), 37 °C, 24 h. Reaction conditions: Substrate 42 (50 mM), (S)‐1‐phenylethylamine (150 mM), PLP (1 m
(30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8.0), DMSO (15% v/v), 37 °C, 2
Phenylalanine and derivatives thereof were deracemized by a combination of E. coli whole cells Phenylalanine and derivatives thereof were deracemized by a combination of E. coli whole cells Phenylalanine and derivatives thereof were deracemized by a combination of E. coli whole cells expressing an LL‐amino acid deaminase and an engineered -amino acid deaminase andDan engineered D -amino acid dehydrogenase to prepare expressing an D‐amino acid dehydrogenase to prepare expressing an L‐amino acid deaminase and an engineered ‐amino acid dehydrogenase to prepare Phenylalanine and derivatives thereof were deracemized by a combination of E. optically pure D -phenylalanines (Scheme 13) [66]. Alternatively, of starting from the from racemate, optically pure D ‐phenylalanines (Scheme 13) [66]. Alternatively, instead of the starting the optically pure D‐phenylalanines (Scheme 13) [66]. Alternatively, instead of instead starting from expressing an L‐amino acid deaminase and an engineered D‐amino acid dehydrogen optically pure L -enantiomers were used as substrate leading to inversion of the absolute configuration. racemate, optically pure L‐enantiomers were used as substrate leading to inversion of the absolute racemate, optically pure L‐enantiomers were used as substrate leading to inversion of the absolute optically pure D‐phenylalanines (Scheme 13) [66]. Alternatively, instead of star Various substituted derivatives of theD‐amino acids were isolated with good yields D -amino acids D were isolated with good yields (69–83%) and configuration. Various substituted derivatives of the ‐amino acids were isolated with good yields configuration. Various substituted derivatives of the racemate, optically pure L‐enantiomers were used as substrate leading to inversion excellent optical purities (95% to >99% ee). (69–83%) and excellent optical purities (95% to >99% ee). (69–83%) and excellent optical purities (95% to >99% ee). configuration. Various substituted derivatives of the D‐amino acids were isolated w (69–83%) and excellent optical purities (95% to >99% ee).
Scheme 13. Deracemization cascade for the preparation of Scheme 13. Deracemization cascade for the preparation of D D‐amino acids 45. Enzyme abbreviations: -amino acids 45. Enzyme abbreviations: Scheme 13. Deracemization cascade for the preparation of D‐amino acids 45. Enzyme abbreviations: L L‐AAD, -AAD, LL‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogenase. -amino acid deaminase; MDPD, meso-diaminopimelate dehydrogenase. L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogenase. Scheme 13. Deracemization cascade for the preparation of D‐amino acids 45. Enzyme ab
4. Lactones
4. Lactones 4. Lactones
L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogenase.
4. Lactones Lactones—and particularly γ‐ and δ‐lactones—are important flavour and fragrance compounds Lactones—and particularly γ‐ and δ‐lactones—are important flavour and fragrance compounds Lactones—and particularly γ- and δ-lactones—are important flavour and fragrance compounds are found in juices, various fruits, juices, wines, and spirits [67]. substituted Furthermore, substituted γ‐ that are found that in various fruits, wines, spirits [67]. Furthermore, γ‐γ-butyrolactones Lactones—and particularly γ‐ and δ‐lactones—are important flavour and fragran that are found in various fruits, juices,and wines, and spirits [67]. Furthermore, substituted butyrolactones occur as a central motif in many natural products, for instance nephrosteranic acid or butyrolactones occur as a central motif in many natural products, for instance nephrosteranic acid or that are found in juices, wines, spirits [68]. [67]. Furthermore, occur as a central motif in many natural products, forvarious instance fruits, nephrosteranic acid orand arctigenin arctigenin [68]. ɛ‐Caprolactone, on the other hand, is a valuable chemical for the preparation of arctigenin [68]. ɛ‐Caprolactone, on the other hand, a valuable chemical the preparation of butyrolactones occur as a central motif in many natural products, for instance nephro -Caprolactone, on the other hand, is a is valuable chemical for thefor preparation of biodegradable polymers, biodegradable polymers, such as polycaprolactone [69] and a precursor for ɛ‐caprolactam. biodegradable polymers, such as polycaprolactone [69] and a precursor for ɛ‐caprolactam. [68]. such as polycaprolactone [69] andarctigenin a precursor for ɛ‐Caprolactone, -caprolactam. on the other hand, is a valuable chemical for the The chemical synthesis of these compounds usually involves a large number of steps, low overall The chemical synthesis of these compounds usually involves a large number of steps, low overall biodegradable polymers, such as polycaprolactone [69] and a precursor for ɛ‐caprolac The chemical synthesis of these compounds usually involves a large number of steps, low overall yields, toxic or otherwise hazardous reagents, and impractical reaction conditions, which makes them yields, toxic or otherwise hazardous reagents, and impractical reaction conditions, which makes them yields, toxic or otherwise hazardousThe chemical synthesis of these compounds usually involves a large number of ste reagents, and impractical reaction conditions, which makes neither “green” nor nor atom‐economic [70–73]. Hence, biocatalytic cascade have neither “green” them nor neither atom‐economic [70–73]. Hence, biocatalytic cascade transformations have yields, toxic or otherwise hazardous reagents, and impractical reaction conditions, wh “green” atom-economic [70–73]. Hence, biocatalytic cascadetransformations transformations have become a useful tool in the preparation of lactones, as they avoid the necessity of time‐consuming become a useful tool in the preparation of lactones, as they avoid the necessity of time‐consuming neither atom‐economic [70–73]. Hence, biocatalytic become a useful tool in the preparation of “green” lactones, nor as they avoid the necessity of time-consuming and cascade transfo and yield‐reducing isolation and purification of intermediates and reduce waste generation to a and yield‐reducing isolation and purification of become a useful tool in the preparation of lactones, as they avoid the necessity of ti intermediates and reduce to a to a minimum. yield-reducing isolation and purification of intermediates and waste reducegeneration waste generation minimum. minimum. and yield‐reducing isolation and in purification of through intermediates and reduce waste g In most of these multi-enzyme sequences, the lactone is formed the final step oxidation In most of these multi‐enzyme sequences, the lactone is formed in the final step through In most of of these multi‐enzyme the lactone is formed (BVMO). in the final step through minimum. a cyclic ketone by asequences, Baeyer–Villiger monooxygenase However, systems that derive the oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). However, systems that oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). However, systems that most of reported. these multi‐enzyme sequences, the lactone is formed in the fina lactone from an acyclic precursor haveIn also been derive the lactone from an acyclic precursor have also been reported. derive the lactone from an acyclic precursor have also been reported. oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). Howeve derive the lactone from an acyclic precursor have also been reported.
(30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8.0), DMSO (15% v/v), 37 °C, 42h 41 42d 73 >99% 42i 26 42e 99 >99% Phenylalanine and derivatives thereof were deracemized by a combination of E a Reaction conditions: Substrate 42 (50 mM), (S)‐1‐phenylet 42f 61 >99% Catalysts 2018, 8, x FOR PEER REVIEW expressing an L‐amino acid deaminase and an engineered D‐amino acid dehydroge (30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8 42g 47 >99% optically pure D‐phenylalanines (Scheme 13) 42h [66]. Alternatively, instead of sta 41 >99% Catalysts 2018, 8, 205 12 of 24 Table 6. Transformation of β‐keto esters 42 into β‐amino acids 44 (Sch racemate, optically pure L‐enantiomers were used as substrate leading to inversion Phenylalanine and derivatives thereof were deracemiz 42i 26 >99% Catalysts 2018, 8, x FOR PEER REVIEW 12 of 23 configuration. Various substituted derivatives of the ‐amino acids were isolated w a Reaction conditions: Substrate 42 (50 mM), (S)‐1‐phenylethylamine (150 m expressing an L‐amino acid deaminase and an engineered Substrate DConv. (%) ee (%) (69–83%) and excellent optical purities (95% to >99% ee). 42a 89 (Scheme >99% pure D‐phenylalanines 13) [66]. Alte (30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8.0), DMSO (15% 4.1. Formation of Lactones by Baeyer–Villiger Monooxygenases inoptically Cascade Systems 4.1. Formation of Lactones by Baeyer–Villiger Monooxygenases in Cascade Systems 42b 96 >99% racemate, optically pure L‐enantiomers were used as subs Scheme 13. Deracemization cascade for the preparation of D‐amino acids 45. Enzyme abbrev The combination of alcohol oxidation by an alcohol dehydrogenase (ADH) 42c and Baeyer–Villiger The combination of alcohol oxidation by an alcohol dehydrogenase (ADH) and Baeyer–Villiger 75 >99% configuration. Various substituted derivatives of the D‐am Phenylalanine and derivatives thereof were deracemized by a combin L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogenase. oxidation of the resulting ketone by a BVMO represents perhaps the simplest biocatalytic cascade 42d 73 >99% oxidation of the resulting ketone by a BVMO represents perhaps the simplest biocatalytic cascade expressing an L(69–83%) and excellent optical purities (95% to >99% ee). ‐amino acid deaminase and an engineered D‐amino acid d 99 >99% system for lactone production. Although this bi-enzymatic reaction represents 42e a double oxidation, system for lactone production. Although this bi‐enzymatic reaction represents a double oxidation, it 13) [66]. Alternatively, inste 4. Lactones optically pure D‐phenylalanines (Scheme 42f 61 >99% it redox-neutralwith withrespect respectto tothe therequired required nicotinamide nicotinamide cofactor, since since the the Baeyer–Villiger is isredox‐neutral Baeyer–Villiger Catalysts 2018, 8, x FOR PEER REVIEW cofactor, racemate, optically pure L‐enantiomers were used as substrate leading to 42g 47 Lactones—and particularly γ‐ and δ‐lactones—are important flavour and fragrance c monooxygenase requires NAD(P)H for reducing one oxygen atom of O22 to water while the other one to water while the other one >99% monooxygenase requires NAD(P)H for reducing one oxygen atom of O configuration. Various substituted derivatives of the D‐amino acids were 42h 41 [67]. >99% that Hence, are found in various juices, wines, and co-substrate spirits sub Table 6. Transformation of β‐keto esters 42 is incorporated into the substrate. molecular oxygenfruits, is the only stoichiometric inFurthermore, is incorporated into the substrate. Hence, molecular oxygen is the only stoichiometric co‐substrate in (69–83%) and excellent optical purities (95% to >99% ee). 42i 26 >99% butyrolactones occur as a central motif in many natural products, for instance nephroster the overall process. the overall process. a Reaction conditions: Substrate 42 (50 mM), (S)‐1‐phenylethylamine (150 mM) Substrate Conv. arctigenin on using the other hand, is a valuable chemical for the pre The conversion of cyclohexanol (47)[68]. into ɛ‐Caprolactone, -caprolactone (49) this cascade concept has been The conversion of cyclohexanol (47) into ɛ‐caprolactone (49) using this cascade concept has been (30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8.0), DMSO (15% v/v 42a 89 biodegradable polymers, such as polycaprolactone [69] and a precursor for ɛ‐caprolactam independently reported by two research groups in 2013 (Scheme 14) [74,75]. independently reported by two research groups in 2013 (Scheme 14) [74,75]. 42b 96 The chemical synthesis of these compounds usually involves a large number of steps, 42c 75 Phenylalanine and derivatives thereof were deracemized by a combinat yields, toxic or otherwise hazardous reagents, and impractical reaction conditions, which m 42d 73 expressing an L‐amino acid deaminase and an engineered D‐amino acid deh 42e transforma 99 neither “green” nor atom‐economic [70–73]. Hence, biocatalytic cascade optically pure D‐phenylalanines (Scheme 13) [66]. Alternatively, instead 42f 61 become a useful tool in the preparation of lactones, as they avoid the necessity of time‐ racemate, optically pure L‐enantiomers were used as substrate leading to in 42g Scheme 13. Deracemization cascade for the preparation of D ‐amino acids 45. Enzyme ab 47 and yield‐reducing isolation and purification of intermediates and reduce waste gene configuration. Various substituted derivatives of the D‐amino acids were iso 42h 41 L ‐AAD, L ‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogenase. minimum. (69–83%) and excellent optical purities (95% to >99% ee). 42i 26
In most of these multi‐enzyme sequences, the lactone is formed in the final st a Reaction conditions: Substrate 42 (50 mM), (S)‐1‐ph 4. Lactones Scheme 13. Deracemization cascade for the preparation of D oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). However, s (30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopim derive the lactone from an acyclic precursor have also been reported. Lactones—and particularly γ‐ and δ‐lactones—are important flavour and fragra that are found in various fruits, juices, wines, and spirits [67]. Furthermore, Phenylalanine and derivatives thereof were dera 4. Lactones butyrolactones occur as a central motif in many natural products, for instance nephro expressing an L‐amino acid deaminase and an engin Scheme 14. 14. Transformation of cyclohexanol (47) to ɛ‐caprolactone (49) using an is alcohol D‐amino acids 45. arctigenin [68]. ɛ‐Caprolactone, on the other hand, a valuable chemical for the Scheme Transformation of cyclohexanol (47) toScheme 13. Deracemization cascade for the preparation of -caprolactone (49) using an alcohol dehydrogenase Lactones—and particularly γ‐ and δ‐lactones—are imp optically pure D‐phenylalanines (Scheme 13) [66]. dehydrogenase (ADH) and a Baeyer–Villiger monooxygenase (BVMO). L ‐AAD, L ‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogen (ADH) and a Baeyer–Villiger monooxygenase (BVMO). biodegradable polymers, such as polycaprolactone [69] and a precursor for ɛ‐caprola that racemate, optically pure are found in various fruits, juices, wines, and s L‐enantiomers were used as The chemical synthesis of these compounds usually involves a large number of st butyrolactones occur as a central motif in many natural pro configuration. Various substituted derivatives of the Both studies show that an efficient transformation of cyclohexanol into ɛ‐caprolactone is feasible 4. Lactones yields, toxic or otherwise hazardous reagents, and impractical reaction conditions, wh arctigenin [68]. the other hand, is a v Both studies show that an efficient transformation of cyclohexanol into ɛ‐Caprolactone, -caprolactone is on feasible (69–83%) and excellent optical purities (95% to >99% e (94% conversion of 60 mM 47, 80% conversion of 10 mM 47); however, both also observed reduced neither “green” nor atom‐economic [70–73]. biocatalytic biodegradable polymers, such as polycaprolactone [69] and (94% conversion of 60 mM 47, 80% conversion ofLactones—and particularly γ‐ and δ‐lactones—are important flavour 10 mM 47); however, both also Hence, observed reduced cascade transfo conversions at elevated substrate concentrations which was attributed to inhibition and deactivation become a useful tool in the preparation of lactones, as they avoid the necessity of t that which are found in The chemical synthesis of these compounds usually inv various fruits, juices, wines, and spirits [67]. Fur conversions at elevated substrate concentrations was attributed and deactivation to inhibition of the Baeyer–Villiger monooxygenase. This issue was addressed in subsequent studies carried out and yield‐reducing and purification of intermediates and reduce waste yields, toxic or otherwise hazardous reagents, and impracti of the Baeyer–Villiger monooxygenase. This butyrolactones occur as a central motif in many natural products, for insta issue was isolation addressed in subsequent studies carried out as as a joint effort of the two involved research groups: [76,77] The ɛ‐caprolactone formed underwent in minimum. neither “green” nor atom‐economic [70–73]. Hence, bio arctigenin [68]. ɛ‐Caprolactone, on the other hand, is chemi a joint effort of the two involved research groups: [76,77] The -caprolactone formed underwent in situa valuable situ ring‐opening oligomerisation enabled by of lipase A multi‐enzyme from Candida sequences, antarctica (CAL‐A), which In most these the lactone is formed in the fin become a useful tool in the preparation of lactones, as the biodegradable polymers, such as polycaprolactone [69] and a precursor fo ring-opening oligomerisation enabled by lipase A from Candida antarctica (CAL-A), which alleviated alleviated product inhibition and produced oligo‐ ‐caprolactone displaying an average molecular Scheme 13. Deracemization cascade for the preparation of and yield‐reducing isolation and purification of intermed The chemical synthesis of these compounds usually involves a large nu product inhibition and producedoxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). Howev oligo--caprolactone displaying an average molecular weight ofD‐amino acids 45. En weight of 375 g/mol. It is worth noting that no hydrolysis of 49 to the hydroxycarboxylic acid was L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogenase derive the lactone from an acyclic precursor have also been reported. minimum. yields, toxic or otherwise hazardous reagents, and impractical reaction cond 375 g/mol. It is worth noting that no hydrolysis of 49 to the hydroxycarboxylic acid was observed. observed. In an additional optimisation approach, the authors chose to use a stabilised variant of most of variant these multi‐enzyme sequences, the casca lacto neither chose “green” nor atom‐economic [70–73]. Hence, biocatalytic In an additional optimisation approach, the authors to use aIn stabilised of cyclohexanone cyclohexanone monooxygenase (CHMO variant C376L/M400I) [78] and to employ the ADH and the 4. Lactones oxidation of a cyclic ketone by a Baeyer–Villiger monooxy become a useful tool in the preparation of lactones, as they avoid the ne monooxygenase (CHMO variant C376L/M400I) [78] and to employ the ADH and the monooxygenase monooxygenase as separate E. coli whole‐cell preparations. Moreover, despite the theoretical redox‐ derive the lactone from an acyclic precursor have also been and yield‐reducing and purification nature of intermediates and redu Lactones—and particularly γ‐ and δ‐lactones—are important flavour an as separate E. coli whole-cell preparations. Moreover, despite theisolation theoretical redox-neutral of neutral nature of the sequence, acetone and D‐glucose (1 equivalent each) were added to improve minimum. that are each) found in added various fruits, juices, wines, and spirits [67]. Furth the sequence, acetone and D-glucose (1 equivalent were to improve cofactor regeneration. cofactor regeneration. These reaction conditions enabled the conversion of 200 mM cyclohexanol (47) In of most these multi‐enzyme sequences, lactone is formed butyrolactones occur as a central motif in many natural products, for instanc These reaction conditions enabled the conversion 200 of mM cyclohexanol (47) within 48 h the going within 48 h going to completion thereby affording a mixture of 75% oligo‐ɛ‐caprolactone and 25% of oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO arctigenin [68]. ɛ‐Caprolactone, on 25% the other hand, is a to completion thereby affording a mixture of 75% oligo-caprolactone and of monomeric 49.valuable chemical monomeric 49. Recently, the co‐expression of CHMO and ADH in E. coli using a Duet™ vector derive the lactone from an acyclic precursor have also been reported. biodegradable polymers, such as polycaprolactone [69] and a precursor for ɛ Recently, the co-expression of CHMO and ADH in E. coli using a Duet™ vector allowed higher allowed higher conversion values of the substrate 47 in whole‐cell biocatalysis compared to an Scheme 13. Deracemization cascade for the preparatio The chemical synthesis of these compounds usually involves a large num conversion values of the substrate 47 in whole-cell biocatalysis compared to an expression of both expression of both enzymes from two separate plasmids [79]. Alternatively, fusion of the alcohol L‐AAD, L‐amino acid deaminase; MDPD, meso‐diamin yields, toxic or otherwise hazardous reagents, and impractical reaction condit enzymes from two separate plasmids [79]. Alternatively, fusion of the alcohol dehydrogenase and dehydrogenase and the BMVO also allowed to engineer the reaction [80]. The same cascade could neither [80]. “green” nor cascade atom‐economic [70–73]. Hence, biocatalytic cascade the BMVO also allowed to engineer the reaction The same could also be achieved using also be achieved using whole cells of Geotrichum candidum CCT 1205 [81]. 4. Lactones become a useful tool in the preparation of lactones, as they avoid the neces whole cells of Geotrichum candidum CCT 1205 [81]. The cascade mentioned above has also been extended by a rhodium‐catalyzed hydrogenation and been yield‐reducing and purification of intermediates and reduce Lactones—and particularly γ‐ and δ‐lactones—ar The cascade mentioned above has also extended byisolation a rhodium-catalyzed hydrogenation step that converts phenol into cyclohexanol (47), which is then employed in the biocatalytic cascade minimum. that are found in various fruits, juices, wines, a step that converts phenol into cyclohexanol (47), which is then employed in the biocatalytic cascade without purification [82]. In most of these butyrolactones occur as a central motif in many natur multi‐enzyme sequences, the lactone is formed in without purification [82]. The formation and in situ oligomerisation of a chiral lactone, (S)‐4‐methyl‐ɛ‐caprolactone (51), oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). arctigenin [68]. ɛ‐Caprolactone, on the other hand, The formation and in situ oligomerisation of a chiral lactone, (S)-4-methyl-caprolactone (51), from 4‐methylcyclohexanol (used as a mixture of cis and trans isomers) via the same biocatalytic derive the lactone from an acyclic precursor have also been reported. from 4-methylcyclohexanol (used as a mixture of cis and transbiodegradable polymers, such as polycaprolactone [6 isomers) via the same biocatalytic cascade was also demonstrated (Scheme 15) [83]. The chemical synthesis of these compounds usua cascade was also demonstrated (Scheme 15) [83]. yields, toxic or otherwise hazardous reagents, and imp neither “green” nor atom‐economic [70–73]. Henc become a useful tool in the preparation of lactones, and yield‐reducing isolation and purification of int minimum. In most of these multi‐enzyme sequences, the
Catalysts 2018, 8, 205
13 of 24
Catalysts 2018, 8, x FOR PEER REVIEW
13 of 23 Scheme 13. Deracemization cascade for the preparation of D‐a
Catalysts 2018, 8, x FOR PEER REVIEW
L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopimela 13 of 23
4. Lactones
Scheme 13. Deracemization cascade for the preparatio Lactones—and particularly γ‐ and δ‐lactones—are impo L‐AAD, L‐amino acid deaminase; MDPD, meso‐diamino that are found in various fruits, juices, wines, and spir butyrolactones occur as a central motif in many natural produ 4. Lactones Scheme 15. Conversion of 4‐methylcyclohexanol (50) into oligo‐(S)‐4‐methyl‐ɛ‐caprolactone (52) arctigenin [68]. ɛ‐Caprolactone, Scheme 15. Conversion of 4-methylcyclohexanol (50) into oligo-(S)-4-methyl-caprolactone (52)on using the other hand, is a val using an alcohol dehydrogenase (ADH), a Baeyer–Villiger monooxygenase (BVMO), and a lipase. an alcohol dehydrogenase (ADH), a Baeyer–Villiger monooxygenase (BVMO), and a lipase. biodegradable polymers, such as polycaprolactone [69] and a Lactones—and particularly γ‐ and δ‐lactones—ar Scheme 15. Conversion of 4‐methylcyclohexanol (50) into oligo‐(S)‐4‐methyl‐ɛ‐caprolactone (52) The chemical synthesis of these compounds usually invo that are found in various fruits, juices, wines, an using an alcohol dehydrogenase (ADH), a Baeyer–Villiger monooxygenase (BVMO), and a lipase. When the alcohol‐to‐lactone cascade system is extended upstream by a hydroxylation step, yields, toxic or otherwise hazardous reagents, and impractical butyrolactones occur as a central motif in many natura When alcohol-to-lactone cascade system is extended upstream by a hydroxylation lactones the can be obtained directly from cycloalkanes. The formation of ɛ‐caprolactone (49), ζ‐ step, When the obtained alcohol‐to‐lactone system is extended upstream by nor a of hydroxylation step, [70–73]. neither “green” atom‐economic Hence, bioca arctigenin [68]. ɛ‐Caprolactone, on the other hand, i enantholactone (55a, n = 2) and η‐caprylolactone (55b, n = 3) from cyclohexane, cycloheptane, and lactones can be directly cascade from cycloalkanes. The formation -caprolactone (49), lactones can be obtained directly from cycloalkanes. The formation of ɛ‐caprolactone (49), ζ‐ cyclooctane, respectively, according to this concept has been demonstrated using a variant of the P450 become a useful tool in the preparation of lactones, as they biodegradable polymers, such as polycaprolactone [69 ζ-enantholactone (55a, n = 2) and η-caprylolactone (55b, n = 3) from cyclohexane, cycloheptane, enantholactone (55a, n = 2) and η‐caprylolactone (55b, n = 3) from cyclohexane, cycloheptane, and monooxygenase BM3 from Bacillus megaterium for introducing the alcohol functionality in the first and yield‐reducing isolation and purification of intermedia The chemical synthesis of these compounds usual and cyclooctane, respectively, according to this concept has been demonstrated using a variant of the cyclooctane, respectively, according to this concept has been demonstrated using a variant of the P450 step (Scheme 16) [84]. The subsequent oxidation to the ketone was performed by an ADH from either minimum. yields, toxic or otherwise hazardous reagents, and imp P450 monooxygenase BM3 from Bacillus megaterium for introducing the alcohol functionality in the monooxygenase BM3 from Bacillus megaterium for introducing the alcohol functionality in the first a Thermus sp. or from Thermoanaerobacter ethanolicus, whereby the latter gave the better results in In neither most these multi‐enzyme sequences, the lactone “green” nor [70–73]. Hence first step (Scheme 16) [84]. The subsequent oxidation to the ketone wasof performed by atom‐economic an ADH from step (Scheme 16) [84]. The subsequent oxidation to the ketone was performed by an ADH from either terms of conversion. The final oxidation to the desired lactone was achieved using a stabilised variant oxidation of a cyclic ketone by a Baeyer–Villiger monooxyg become a useful tool in the preparation of lactones, a eithera aThermus Thermussp. sp.or orfrom fromThermoanaerobacter Thermoanaerobacter ethanolicus, whereby the latter gave the better results in ethanolicus, whereby the latter gave the better results in of cyclohexanone monooxygenase from Acinetobacter sp. NCIMB 9871. derive the lactone from an acyclic precursor have also been re and yield‐reducing isolation variant and purification of inte termsterms of conversion. The final oxidation to the desired lactone was achieved using a stabilised variant of conversion. The final oxidation to the desired lactone was achieved using a stabilised of cyclohexanone 9871. of cyclohexanone monooxygenase from Acinetobacter sp. NCIMB 9871. monooxygenase from Acinetobacter sp. NCIMBminimum. In most of these multi‐enzyme sequences, the oxidation of a cyclic ketone by a Baeyer–Villiger mon derive the lactone from an acyclic precursor have also
Scheme 16. Biocatalytic synthesis of lactones from cycloalkanes using a P450 monooxygenase (P450), an alcohol dehydrogenase (ADH), and a Baeyer–Villiger monooxygenase (BVMO). Scheme 16. Biocatalytic synthesis of lactones from cycloalkanes using a P450 monooxygenase (P450), Scheme 16. Biocatalytic synthesis of lactones from cycloalkanes using a P450 monooxygenase (P450), an alcohol dehydrogenase (ADH), and a Baeyer–Villiger monooxygenase (BVMO). Although the use of a “designer cell” co‐expressing all three enzymes did allow production of
an alcohol dehydrogenase (ADH), and a Baeyer–Villiger monooxygenase (BVMO). the desired lactones, yields were generally low (less than 1 mM from 149–185 mM cycloalkane). Although the use of a “designer cell” co‐expressing all three enzymes did allow production of Therefore, a cascade was tested instead in which the biocatalysts were added as separate cell‐free Although the of yields acofactor “designer cell” co-expressing all by three enzymes didcoli allow production the desired lactones, were generally low than 1 mM from 149–185 mM cycloalkane). extracts and in use which regeneration was (less realised endogenous E. enzymes and the of the desired lactones, yields were generally low (less than 1 mM from 149–185 mM cycloalkane). Therefore, Therefore, a cascade was tested instead in which the biocatalysts were added as separate cell‐free simple addition of D‐glucose and glycerol. Using this reaction setup, 3.2 mM of ζ‐enantholactone extracts and in which cofactor regeneration was realised by endogenous E. coli enzymes and the a cascade instead in which thewithin biocatalysts were addedof asan separate cell-free and in (55b) was were tested formed from cycloheptane 20 h. The addition external cofactor extracts recycling simple addition of D ‐glucose and glycerol. Using this reaction setup, 3.2 mM of ζ‐enantholactone system, consisting of sodium formate and a formate dehydrogenase (FDH), the final of which cofactor regeneration was realised by endogenous E. coli enzymes and increased the simple addition (55b) and were glycerol. formed from h. mM The of addition of an external cofactor concentration of 55b to 10.6 mM, and raising the biocatalyst amounts by a factor of 3.75 resulted in D-glucose Usingcycloheptane this reactionwithin setup,20 3.2 ζ-enantholactone (55b) wererecycling formed from system, consisting of sodium formate and a formate dehydrogenase (FDH), increased the final the formation of 23.3 mM 55b. Table 7 summarizes the results obtained with all three investigated cycloheptane within 20 h. The addition of an external cofactor recycling system, consisting of sodium concentration of 55b to 10.6 mM, and raising the biocatalyst amounts by a factor of 3.75 resulted in substrates. formate and a formate dehydrogenase (FDH), increased the final concentration of 55b to 10.6 mM, and the formation of 23.3 mM 55b. Table 7 summarizes the results obtained with all three investigated raising the biocatalyst amounts by a factor of 3.75 resulted in the formation of 23.3 mM 55b. Table 7 substrates. Table 7. Results of the biocatalytic synthesis of lactones from cycloalkanes (Scheme 16) a.
summarizes the results obtained with all three investigated substrates.
Product Concentrations (mM) a. Table 7. Results of the biocatalytic synthesis of lactones from cycloalkanes (Scheme 16) Substrate TTN b Alcohol Ketone Lactone Table 7. Results of the biocatalytic synthesis of lactones from cycloalkanes (Scheme 16) a . Product Concentrations (mM) Cyclohexane 822 0 0 5.18 Substrate TTN b Alcohol Ketone Lactone Cycloheptane 4185 0.48 2.63 23.25 Product Concentrations (mM) Cyclooctane 1017 0.27 2.40 3.74 Cyclohexane 0 0 5.18 b Substrate TTN 822 Ketone23.25 Lactone a Reaction conditions: Substrate 53 (149–185 mM), P450 (6.3 μM), ADH (cell‐free extract of 150 mg Cycloheptane 4185 Alcohol 0.48 2.63 Cyclooctane 8221017 0.27 2.40 0 3.74 wet‐cell weight per mL), CHMO (cell‐free extract of 75 mg wet‐cell weight per mL), FDH (cell‐free Cyclohexane 0 5.18
a Reaction conditions: Substrate 53 (149–185 mM), P450 (6.3 μM), ADH (cell‐free extract of 150 mg Cycloheptane 4185 D‐glucose (100 mM), glycerol (100 mM), sodium formate 0.48 2.63 23.25 extract of 75 mg wet‐cell weight per mL), + (100 μM), NADP+ (100 μM), Tris‐HCl buffer (200 mM, pH 8.0), 30 °C, 24 h. b Total wet‐cell weight per mL), CHMO (cell‐free extract of 75 mg wet‐cell weight per mL), FDH (cell‐free Cyclooctane 1017 0.27 2.40 3.74 (100 mM), NAD a Reaction ‐glucose (100 mM), glycerol (100 mM), sodium formate extract of 75 mg wet‐cell weight per mL), turnover number: molar amount of products formed per molar amount of P450. conditions: Substrate 53 (149–185 mM),DP450 (6.3 µM), ADH (cell-free extract of 150 mg wet-cell weight + (100 μM), NADP+ (100 μM), Tris‐HCl buffer (200 mM, pH 8.0), 30 °C, 24 h. b Total (100 mM), NAD per mL), CHMO (cell-free extract of 75 mg wet-cell weight per mL), FDH (cell-free extract of 75 mg wet-cell weight per mL), D -glucose (100 mM), glycerol (100 mM), sodium formate (100 mM), NAD+ (100 µM), NADP+ (100 µM), turnover number: molar amount of products formed per molar amount of P450. Tris-HCl buffer (200 mM, pH 8.0), 30 ◦ C, 24 h. b Total turnover number: molar amount of products formed per molar amount of P450.
optically pure (30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8.0), DMSO (15% D‐phenylalanines (Scheme 13) [66]. Alternatively, instead of racemate, optically pure L‐enantiomers were used as substrate leading to inversi Scheme 13. Deracemization cascade for the preparation of D‐amino acids 45. Enzyme abbreviations: configuration. Various substituted derivatives of the D‐amino acids were isolated Phenylalanine and derivatives thereof were deracemized by a comb L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogenase. (69–83%) and excellent optical purities (95% to >99% ee). expressing an L‐amino acid deaminase and an engineered D‐amino acid Catalysts 2018, 8, x FOR PEER REVIEW 14 of 23 optically pure D ‐phenylalanines (Scheme 13) [66]. Alternatively, ins Catalysts 2018, 8, 205 14 of 24 4. Lactones Scheme 13. Deracemization cascade for the preparat Catalysts 2018, 8, x FOR PEER REVIEW 14 of 23 racemate, optically pure LL‐AAD, ‐enantiomers were used as substrate leading Interestingly, alcohol dehydrogenases and BVMOs have been combined for lactone synthesis L‐amino acid deaminase; MDPD, meso‐diami Lactones—and particularly γ‐ and δ‐lactones—are important flavour and fragrance compounds also in a second, entirely different way: The configuration. Various substituted derivatives of the Baeyer–Villiger oxidation of cyclohexanone (48) to ɛ‐D‐amino acids wer that are found in various fruits, alcohol juices, dehydrogenases wines, and spirits [67]. Furthermore, substituted Interestingly, and BVMOs have been combined forγ‐lactone synthesis Interestingly, alcohol dehydrogenases and BVMOs have been combined for lactone synthesis (69–83%) and excellent optical purities (95% to >99% ee). caprolactone (49) catalysed by cyclohexanone monooxygenase has been coupled with the double 4. Lactones butyrolactones occur as a central motif in many natural products, for instance nephrosteranic acid or also in a second, entirely different way: The Baeyer–Villiger oxidation of cyclohexanone (48) also in a second, entirely different way: The Baeyer–Villiger oxidation of cyclohexanone (48) to to ɛ‐ oxidation of hexane‐1,6‐diol (56) to 49 (via the intermediate lactol 57) catalysed by the ADH from arctigenin [68]. caprolactone ɛ‐Caprolactone, on the other hand, is a valuable chemical for the preparation of Lactones—and particularly γ‐ and δ‐lactones—a -caprolactone(49) (49) catalysed by cyclohexanone monooxygenase has been coupled with the double catalysed by cyclohexanone monooxygenase has been coupled with the double convergent cascade system is redox‐neutral with Thermoanaerobacter ethanolicus [85]. The resulting biodegradable polymers, such as polycaprolactone [69] and a precursor for ɛ‐caprolactam. that found by in the various oxidation of hexane-1,6-diol (56) to 49 (via the intermediate lactol 57)are catalysed ADH fruits, from juices, wines, oxidation of hexane‐1,6‐diol (56) to 49 (via the intermediate lactol 57) catalysed by the ADH from respect to the nicotinamide cofactor and theoretically produces three molecules of ɛ‐caprolactone (49) The chemical synthesis of these compounds usually involves a large number of steps, low overall butyrolactones occur as a central motif in many natu Thermoanaerobacter ethanolicus [85]. The resulting convergent cascade system is redox-neutral with Thermoanaerobacter ethanolicus [85]. The resulting convergent cascade system is redox‐neutral with from two molecules of 48 and one molecule of 56 (Scheme 17). yields, toxic or otherwise hazardous reagents, and impractical reaction conditions, which makes them arctigenin [68]. on the other hand, respect to the nicotinamide cofactor and theoretically produces three molecules of ɛ‐Caprolactone, -caprolactone (49) respect to the nicotinamide cofactor and theoretically produces three molecules of ɛ‐caprolactone (49) neither “green” from two molecules of 48 and one molecule of 56 (Scheme 17). nor two atom‐economic Hence, biocatalytic cascade have biodegradable polymers, such as polycaprolactone [6 from molecules of [70–73]. 48 and one molecule of 56 (Scheme 17).transformations become a useful tool in the preparation of lactones, as they avoid the necessity of time‐consuming The chemical synthesis of these compounds usua and yield‐reducing generation to a yields, toxic or otherwise hazardous reagents, and im isolation and purification of intermediates and reduce waste minimum. neither “green” nor atom‐economic [70–73]. Hen In most of these multi‐enzyme sequences, the lactone is formed in the final step through become a useful tool in the preparation of lactones, Scheme 13. Deracemization cascade for the preparation of ‐amino acids 45. Enzyme oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). However, systems that and yield‐reducing isolation Dand purification of in L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogenase. derive the lactone from an acyclic precursor have also been reported. minimum. In most of these multi‐enzyme sequences, th 4. Lactones oxidation of a cyclic ketone by a Baeyer–Villiger mo Scheme 13. Deracemization cascade for the preparation of D‐amino acids 4 derive the lactone from an acyclic precursor have als Lactones—and particularly γ‐ and δ‐lactones—are important flavour and frag
L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydroge that are found in various fruits, juices, wines, and spirits [67]. Furthermo Scheme 17. Convergent cascade synthesis of ɛ‐caprolactone (49) from 1,6‐hexanediol (56) and butyrolactones occur as a central motif in many natural products, for instance nep cyclohexanone (48). Enzyme abbreviations: ADH, alcohol dehydrogenase; BVMO, Baeyer–Villiger 4. Lactones Scheme 17. cascade synthesis of ɛ‐caprolactone (49) (49) from 1,6‐hexanediol (56) arctigenin [68]. on from the other hand, is and a valuable chemical for t Scheme 17. Convergent Convergent cascade synthesis of ɛ‐Caprolactone, -caprolactone 1,6-hexanediol (56) monooxygenase . cyclohexanone (48). Enzyme abbreviations: ADH, Lactones—and particularly γ‐ and δ‐lactones—are important flavou alcohol dehydrogenase; BVMO, Baeyer–Villiger and cyclohexanone (48). Enzyme abbreviations: ADH, alcohol dehydrogenase; BVMO, Baeyer biodegradable polymers, such as polycaprolactone [69] and a precursor for ɛ‐capr –Villiger monooxygenase. monooxygenase . The chemical synthesis of these compounds usually involves a large number o are found in of various fruits, juices, wines, and spirits [67]. Fu However, in practice the formation of that three equivalents ɛ‐caprolactone (49) was never
yields, toxic or otherwise hazardous reagents, and impractical reaction conditions, observed despite complete depletion of the butyrolactones occur as a central motif in many natural products, for inst starting materials due to undesired hydrolysis and However, in practice the formation of three equivalents of ɛ‐caprolactone (49) was never neither “green” nor atom‐economic [70–73]. Hence, biocatalytic cascade chem tran arctigenin [68]. on was the other hand, is a valuable However, in practice the formation of three equivalents of ɛ‐Caprolactone, -caprolactone (49) never observed oligomerisation of 49 under the reaction conditions. Nevertheless, up to 18.3 mM of 49 were formed observed despite complete depletion of the starting materials due to undesired hydrolysis and become a useful tool in the preparation of lactones, as they avoid the necessity o biodegradable polymers, such as polycaprolactone [69] and a precursor f despite complete depletion of the starting materials due to undesired hydrolysis and oligomerisation from 20 mM of 48 and 10 mM of 56 within a reaction time of 72 h, corresponding to an analytical oligomerisation of 49 under the reaction conditions. Nevertheless, up to 18.3 mM of 49 were formed and yield‐reducing isolation purification of intermediates The chemical synthesis of these compounds usually involves a large of 49 under the reaction conditions. Nevertheless, up to 18.3 mM ofand 49 were formed from 20 mM of 48 and reduce was yield of 61%. from 20 mM of 48 and 10 mM of 56 within a reaction time of 72 h, corresponding to an analytical minimum. yields, toxic or otherwise hazardous reagents, and impractical reaction co and 10 mM of 56asymmetric within a reaction time ofof 72prochiral h, corresponding to an analytical yield of 61%. by ene‐ When the reduction α,β‐unsaturated ketones catalysed yield of 61%. In most of these multi‐enzyme sequences, the lactone is formed in the neither “green” nor atom‐economic [70–73]. Hence, biocatalytic casf When the asymmetric reduction of prochiral α,β-unsaturated ketones catalysed by ene-reductases reductases is combined with the oxidation by a Baeyer–Villiger monooxygenase catalysed by When the asymmetric reduction of prochiral α,β‐unsaturated ketones catalysed by ene‐ oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). How become a useful tool in the preparation of lactones, as they avoid the n is combined with the oxidation by a Baeyer–Villiger monooxygenase catalysed by BVMOs, BVMOs, chiral lactones are obtained. This concept has first been put into practice in a biocatalytic reductases is combined with the oxidation by been a Baeyer–Villiger monooxygenase catalysed by derive the lactone from an acyclic precursor have also been reported. and yield‐reducing isolation purification of intermediates and red chiral lactones are obtained. This concept has first put into18), practice inare aand biocatalytic synthesis of synthesis of 5‐alkyl‐substituted δ‐valerolactones 60 (Scheme which flavour and fragrance BVMOs, chiral lactones are obtained. This concept has first been put into practice in a biocatalytic minimum. 5-alkyl-substituted compounds [86]. δ-valerolactones 60 (Scheme 18), which are flavour and fragrance compounds [86]. synthesis of 5‐alkyl‐substituted δ‐valerolactones 60 which are flavour and fragrance In (Scheme most of 18), these multi‐enzyme sequences, the lactone is formed compounds [86]. oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVM derive the lactone from an acyclic precursor have also been reported.
Scheme 18. 18. Preparation 2‐alkylidenecyclopentanones 58. Scheme Preparation of of (R)‐δ‐valerolactones (R)-δ-valerolactones 60 60 starting starting from from 2-alkylidenecyclopentanones 58. Enzyme abbreviations: Baeyer–Villiger monooxygenase; GDH, D‐ Enzyme abbreviations: ERED, ERED,ene‐reductase; ene-reductase;BVMO, BVMO, Baeyer–Villiger monooxygenase; GDH, Scheme 18. Preparation of (R)‐δ‐valerolactones 60 starting from 2‐alkylidenecyclopentanones 58. glucose dehydrogenase. D -glucose dehydrogenase. Enzyme abbreviations: ERED, ene‐reductase; BVMO, Baeyer–Villiger monooxygenase; GDH, D‐ glucose dehydrogenase. In this study, Acinetobacter sp. RS1 was shown to be the best organism for the C=C‐reduction
In this study, Acinetobacter sp. RS1 was shown to be the best organism for the C=C-reduction step regarding activity, growth and enantioselectivity by screening 200 alkane‐, toluene‐ or benzene‐ step In this study, Acinetobacter sp. RS1 was shown to be the best organism for the C=C‐reduction regarding activity, growth and enantioselectivity by screening 200 alkane-, toluene- or benzenedegrading microbial strains. Already after 2 h, the reaction reached >99% conversion, producing (R)‐ degrading microbial strains. Already after 2 h, the reaction reached >99% conversion, producing step regarding activity, growth and enantioselectivity by screening 200 alkane‐, toluene‐ or benzene‐ 59a and (R)‐59b with 87% and 92% ee, respectively. For the following Baeyer–Villiger oxidation, (R)-59a and (R)-59b with 87% and 92% ee, respectively. For the following Baeyer–Villiger oxidation, degrading microbial strains. Already after 2 h, the reaction reached >99% conversion, producing (R)‐ resting cells of Escherichia coli containing a cyclohexanone monooxygenase (CHMO) and a glucose resting of Escherichia containing a cyclohexanone monooxygenase (CHMO) andoxidation, a glucose 59a and cells (R)‐59b with 87% coli and 92% ee, respectively. For the following Baeyer–Villiger dehydrogenase (GDH) were employed. In initial experiments, an undesired oxidation activity on dehydrogenase (GDH) were employed. In initial experiments, an undesired oxidation activity on resting cells of Escherichia coli containing a cyclohexanone monooxygenase (CHMO) and a glucose substrates 58 was observed; consequently, the one‐pot cascade was carried out in a sequential substrates 58 was(GDH) observed; consequently, theinitial one-pot cascade was carried out inoxidation a sequential fashion, dehydrogenase were employed. In experiments, an undesired activity on fashion, producing (R)‐60a and (R)‐60b with 83% and 66% conversion and 98% and 97% ee, producing (R)-60a and (R)-60b with 83% and 66% conversion and 98% and 97% ee, respectively. substrates 58 was observed; consequently, the one‐pot cascade was carried out in a sequential respectively. The improved enantiomeric excess of the products 60 compared to the intermediates 59 fashion, producing (R)‐60a and (R)‐60b with 83% and 66% conversion and 98% and 97% ee, respectively. The improved enantiomeric excess of the products 60 compared to the intermediates 59
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The improved enantiomeric excess of the products 60 compared to the intermediates 59 was shown was shown to be a consequence of the hydrolysis of the lactone catalysed by the Acinetobacter cells. was shown to be a consequence of the hydrolysis of the lactone catalysed by the Acinetobacter cells. to be a consequence of the hydrolysis of the catalysed by the Acinetobacter cells. Thereby was shown to be a consequence of the hydrolysis of the lactone catalysed by the Acinetobacter cells. Thereby the (S)‐enantiomers of lactones 60 lactone were preferentially converted (E = 8–11). Hence, the the Thereby the (S)‐enantiomers of lactones 60 were preferentially converted (E = 8–11). Hence, the of (S)-enantiomers of lactones were preferentially converted (E = 8–11). Hence, the optical Thereby the (S)‐enantiomers of 60 lactones 60 were preferentially converted (E = 8–11). Hence, purity the optical purity of the desired products increased over time due to removal of the minor enantiomer. the desired over time due to removal of the minor enantiomer. As a(40 final proof of optical purity of the desired products increased over time due to removal of the minor enantiomer. optical purity of the desired products increased over time due to removal of the minor enantiomer. As a final products proof of increased concept, preparative‐scale transformations with 58a and 58b mg) were As As a final proof of concept, preparative‐scale transformations with 58a and 58b (40 mg) were concept, preparative-scale transformations with 58a and 58b (40 mg) were performed and the lactones a final proof of concept, preparative‐scale transformations with 58a and 58b (40 mg) were performed and the lactones 60a and 60b were isolated in 56% and 41% yield (98% and 97% ee), performed and the lactones and 60b were isolated in 56% and 41% yield (98% and 97% ee), 60a andand 60b were isolated in60a 56% and 41% yield (98% in and 97% ee), respectively. performed the lactones 60a and 60b were isolated 56% and 41% yield (98% and 97% ee), respectively. A similar combination of ene-reductases and Baeyer–Villiger monooxygenases, extended by an respectively. respectively. A similar combination of ene‐reductases and Baeyer–Villiger monooxygenases, extended by an A similar combination of ene‐reductases and Baeyer–Villiger monooxygenases, extended by an A similar combination of ene‐reductases and Baeyer–Villiger monooxygenases, extended by an ADH-catalysed step, has been investigated for the preparation of ε-caprolactone derivatives 64 from ADH‐catalysed step, has been investigated for the preparation of ε‐caprolactone derivatives 64 from ADH‐catalysed step, has been investigated for the preparation of ε‐caprolactone derivatives 64 from cyclohexenol derivatives 61 (Scheme This particular particular cascade cascade was was termed termed an an “artificial ADH‐catalysed step, has been investigated for the preparation of ε‐caprolactone derivatives 64 from cyclohexenol derivatives 61 (Scheme 19) 19) [87,88]. [87,88]. This “artificial cyclohexenol derivatives 61 (Scheme 19) [87,88]. This particular cascade was termed an “artificial cyclohexenol derivatives 61 (Scheme 19) [87,88]. This particular cascade was termed an “artificial in metabolic mini pathway” by the authors, meaning that all the required enzymes were co-expressed metabolic mini pathway” by the authors, meaning that all the required enzymes were co‐expressed metabolic mini pathway” by the authors, meaning that all the required enzymes were co‐expressed E. coli, while in nature they are not connected in a single organism in a metabolic context. metabolic mini pathway” by the authors, meaning that all the required enzymes were co‐expressed in E. coli, while in nature they are not connected in a single organism in a metabolic context. in E. coli, while in nature they are not connected in a single organism in a metabolic context. in E. coli, while in nature they are not connected in a single organism in a metabolic context.
Scheme 19. “Artificial metabolic mini pathway” for the synthesis of ε‐caprolactone derivatives 64.
Scheme 19. “Artificial metabolic mini pathway” for the synthesis of ε-caprolactone derivatives Scheme 19. “Artificial metabolic mini pathway” for the synthesis of ε‐caprolactone derivatives 64. Scheme 19. “Artificial metabolic mini pathway” for the synthesis of ε‐caprolactone derivatives 64. Enzyme abbreviations: ADH, alcohol dehydrogenase; ERED, ene‐reductase; BVMO, Baeyer–Villiger 64. Enzyme abbreviations: ADH, alcohol dehydrogenase; ERED, ene-reductase; BVMO, Enzyme abbreviations: ADH, alcohol dehydrogenase; ERED, ene‐reductase; BVMO, Baeyer–Villiger Enzyme abbreviations: ADH, alcohol dehydrogenase; ERED, ene‐reductase; BVMO, Baeyer–Villiger Enzyme abbreviations: ADH, alcohol dehydrogenase; ERED, ene‐reductase; BVMO, Baeyer–Villiger monooxygenase. Baeyer–Villiger monooxygenase. monooxygenase. monooxygenase. monooxygenase.
Suitable enzyme candidates for each individual step of the cascade were identified whereby the Suitable enzyme candidates for each individual step of the cascade were identified whereby Suitable enzyme candidates for each individual step of the cascade were identified whereby the Suitable enzyme candidates for each individual step of the cascade were identified whereby the ADH from Lactobacillus kefir, the ene‐reductase XenB from Pseudomonas sp., and the well‐known the ADH from Lactobacillus kefir, the ene-reductase XenB from Pseudomonas sp., and thewell‐known well-known ADH from Lactobacillus kefir, the ene‐reductase XenB from Pseudomonas sp., and the ADH from Lactobacillus kefir, the ene‐reductase XenB from Pseudomonas sp., and the well‐known cyclohexanone monooxygenase from Acinetobacter sp. performed best for most of tested cyclohexanone monooxygenase from Acinetobacter sp. performed best for most of the tested the substrates. cyclohexanone monooxygenase from Acinetobacter sp. performed best for most of the tested cyclohexanone monooxygenase from Acinetobacter sp. performed best for most of the tested substrates. Cofactor regeneration was via performed via the ofmetabolism of the E. coli host. Table 8 Cofactor regeneration was performed the metabolism the E. coli host. Table 8 summarises the substrates. Cofactor regeneration was performed via the metabolism the coli host. Table substrates. Cofactor regeneration was performed via the metabolism of of the E. E. coli host. Table 8 8 summarises the results of the substrates tested. results of the substrates tested. summarises the results of the substrates tested. summarises the results of the substrates tested. Table 8. 8. Overview for for the the synthesis of of ε‐ Table Overviewof ofresults resultsof ofthe the“artificial “artificialmetabolic metabolicmini minipathway” pathway” synthesis Table 8. Overview of results of the “artificial metabolic mini pathway” for the synthesis of ε‐ a Table 8. Overview of results of the “artificial metabolic mini pathway” for the synthesis of ε‐ a Table 8. Overview of results of the “artificial metabolic mini pathway” for the synthesis of ε‐ caprolactone derivatives 64 (Scheme 19) ε-caprolactone derivatives 64 (Scheme 19). . a. caprolactone derivatives 64 (Scheme 19) aa. a. caprolactone derivatives 64 (Scheme 19) caprolactone derivatives 64 (Scheme 19) Substrate Product Time (h) Conv. (%) ee/de (%) Substrate Product Time (h) Conv.ee/de (%) (%) ee/de (%) Substrate Product Time (h) Time (h) Conv. (%) ee/de (%) Substrate Product Conv. (%) Substrate Product Time (h) Conv. (%) ee/de (%)
>99 n.a. b b bb n.a. b >99 >99 n.a. >99 n.a.
20 20 20 20 20
>99 >99 >99 >99 >99 >99 >99 >99 >99 >99
20 20 20 20 20
64 >99 64 64 >99 >99 >99 >99 64 64
b
21 21 21 21
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Table 8. Cont. Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Product Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Substrate Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW
Time (h)
Conv. (%)
ee/de (%)
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Table 6. Transformation of β‐keto esters 42 into β‐amino acids 44 (Scheme 12) a.
Substrate Conv. (%) ee (%) 86 86 20 20 20 86 42a 89 >99% 86 20 20 86 20 86 20 86 42b 96 >99% 42c 75 >99% 42d 73 >99% 42e 99 >99% 42f 61 >99% 42g 47 >99% 63 63 20 20 63 42h 41 >99% 20 63 20 20 63 20 63 20 63 42i 26 >99%
>99 >99 >99 >99 >99 >99
>99
>99 >99 >99 >99 >99 >99
>99
Reaction conditions: Substrate 42 (50 mM), (S)‐1‐phenylethylamine (150 mM), PLP (1 mM), lipase (30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8.0), DMSO (15% v/v), 37 °C, 24 h. a
Phenylalanine and derivatives thereof were deracemized by a combination of E. coli whole cells expressing an L‐amino acid deaminase and an engineered D‐amino acid dehydrogenase to prepare optically pure D‐phenylalanines (Scheme 13) 20 [66]. instead of starting from the 20 Alternatively, >99 93 93 >99 20 93 >99 20 93 >99 20 93 >99 20 93 >99 20 93 >99 racemate, optically pure L‐enantiomers were used as substrate leading to inversion of the absolute configuration. Various substituted derivatives of the D‐amino acids were isolated with good yields (69–83%) and excellent optical purities (95% to >99% ee).
20 20 20 20 20 20 20
>99 >99 >99 >99 >99 >99 >99 >99 >99 >99 >99 >99 >99
>99
a Reaction conditions: Substrate (2.5–4.0 mM), resting E. coli cells (concentration not reported), 24 °C, a Reaction conditions: Substrate (2.5–4.0 mM), resting E. coli cells (concentration not reported), 24 °C, aa Reaction conditions: Substrate (2.5–4.0 mM), resting E. coli cells (concentration not reported), 24 °C, Reaction conditions: Substrate (2.5–4.0 mM), resting E. coli cells (concentration not reported), 24 °C, a Reaction conditions: Substrate (2.5–4.0 mM), resting E. coli cells (concentration not reported), 24 ◦ C, 48 h. b n.a.: Reaction conditions: Substrate (2.5–4.0 mM), resting E. coli cells (concentration not reported), 24 °C, Reaction conditions: Substrate (2.5–4.0 mM), resting E. coli cells (concentration not reported), 24 °C, b b b b n.a.: not applicable. 48 h. n.a.: not applicable. 48 h. b b n.a.: not applicable. bapplicable. b n.a.: not applicable. 48 h. 48 h. not n.a.: not applicable. 48 h. n.a.: not applicable. 48 h.
aa aa
Interestingly, substrate rac‐61d was oxidized by ADH from Lactobacillus kefir with 100% Interestingly, substrate rac‐61d was oxidized by ADH from Lactobacillus kefir with 100% Interestingly, substrate rac‐61d was oxidized by ADH from Lactobacillus kefir with 100% Interestingly, substrate rac-61d was oxidized by ADH from Lactobacillus kefir with 100% conversion, Interestingly, substrate rac‐61d was oxidized by ADH from Lactobacillus kefir with 100% Interestingly, substrate rac‐61d was oxidized by ADH from Lactobacillus kefir with 100% conversion, but the ene‐reductase from Pseudomonas sp. did not accept intermediate 62d, although it conversion, but the ene‐reductase from Pseudomonas sp. did not accept intermediate 62d, although it conversion, but the ene‐reductase from Pseudomonas sp. did not accept intermediate 62d, although it but the ene-reductase from Pseudomonas sp. did not accept intermediate 62d, although it was active on conversion, but the ene‐reductase from Pseudomonas sp. did not accept intermediate 62d, although it conversion, but the ene‐reductase from Pseudomonas sp. did not accept intermediate 62d, although it was active on on the regioisomeric 62c. Therefore, an additional ERED was investigated, namely old was active the regioisomeric 62c. Therefore, an additional ERED was investigated, namely old was active the regioisomeric 62c. Therefore, an additional ERED was investigated, namely old 1 the regioisomeric 62c. Therefore, an additional ERED was investigated, namely old yellow enzyme was active on on the regioisomeric 62c. Therefore, an additional ERED was investigated, namely old was active on the regioisomeric 62c. Therefore, an additional ERED was investigated, namely old yellow enzyme 1 (OYE1) from Saccharomyces carlsbergensis, which yielded optically pure (S)‐63d, Scheme 13. Deracemization cascade for the preparation of D‐amino acids 45. Enzyme abbreviations: yellow enzyme 1 from Saccharomyces carlsbergensis, which yielded optically pure (S)‐63d, yellow enzyme 1 (OYE1) (OYE1) from Saccharomyces carlsbergensis, which yielded optically pure (S)‐63d, (OYE1) from1 carlsbergensis, which yielded optically pure (S)-63d, whichpure was then further yellow enzyme 1 Saccharomyces (OYE1) from Saccharomyces carlsbergensis, which yielded optically pure (S)‐63d, yellow enzyme (OYE1) from Saccharomyces carlsbergensis, which yielded optically (S)‐63d, which was then further oxidized to lactone (S)‐64d. which was then further oxidized to lactone (S)‐64d. L‐AAD, L‐amino acid deaminase; MDPD, meso‐diaminopimelate dehydrogenase. which was then further oxidized to lactone (S)‐64d. oxidized to lactone (S)-64d. which was then further oxidized to lactone (S)‐64d. which was then further oxidized to lactone (S)‐64d. Preparative‐scale biotransformations with substrates rac‐61d and (1S,5S)‐61e (100 mg) afforded Preparative‐scale biotransformations with substrates rac‐61d and (1S,5S)‐61e (100 mg) afforded Preparative‐scale biotransformations with substrates rac‐61d and (1S,5S)‐61e (100 mg) afforded Preparative-scale biotransformations with substrates rac-61d and (1S,5S)-61e (100 mg) afforded Preparative‐scale biotransformations with substrates rac‐61d and (1S,5S)‐61e (100 mg) afforded Preparative‐scale biotransformations with substrates rac‐61d and (1S,5S)‐61e (100 mg) afforded 4. Lactones the products (S)‐64d and (3R,6R)‐64e in 55% and 60% isolated yield, respectively, and in >99% ee/de. the products (S)‐64d and (3R,6R)‐64e in 55% and 60% isolated yield, respectively, and in >99% ee/de. the products (S)‐64d and (3R,6R)‐64e in 55% and 60% isolated yield, respectively, and in >99% ee/de. the products (S)-64d and (3R,6R)-64e in 55% and 60% isolated yield, respectively, and in >99% ee/de. the products (S)‐64d and (3R,6R)‐64e in 55% and 60% isolated yield, respectively, and in >99% ee/de. the products (S)‐64d and (3R,6R)‐64e in 55% and 60% isolated yield, respectively, and in >99% ee/de. In a subsequent study, three ene‐reductases from Pseudomonas putida were used in a very similar In a subsequent study, three ene‐reductases from Pseudomonas putida were used in a very similar In a subsequent study, three ene‐reductases from Pseudomonas putida were used in a very similar InLactones—and particularly γ‐ and δ‐lactones—are important flavour and fragrance compounds a subsequent study, three ene-reductases from Pseudomonas putida were used in a very similar In a subsequent study, three ene‐reductases from Pseudomonas putida were used in a very similar In a subsequent study, three ene‐reductases from Pseudomonas putida were used in a very similar cascade, in in this case implemented using isolated enzymes (purified enzymes and crude cell‐free cascade, case implemented using isolated enzymes (purified enzymes and crude cell‐free that are found in various fruits, juices, wines, and spirits [67]. Furthermore, substituted cascade, in this case implemented using isolated enzymes (purified enzymes and crude cell‐free cascade, inthis this case implemented using isolated enzymes (purified enzymes and crude cell-freeγ‐ cascade, in this case implemented using isolated enzymes (purified enzymes and crude cell‐free cascade, in this case implemented using isolated enzymes (purified enzymes and crude cell‐free extracts) [89]. Cyclohexenol, cyclohexanone, and cyclopentenone were investigated, leading to extracts) [89]. Cyclohexenol, cyclohexanone, and cyclopentenone were investigated, leading to δ‐ δ‐ butyrolactones occur as a central motif in many natural products, for instance nephrosteranic acid or extracts) [89]. Cyclohexenol, cyclohexanone, and cyclopentenone were investigated, leading extracts) [89]. Cyclohexenol, cyclohexanone, and cyclopentenone were investigated, leading extracts) [89]. Cyclohexenol, cyclohexanone, and cyclopentenone were investigated, leading to to δ‐ δ‐to extracts) [89]. Cyclohexenol, cyclohexanone, and cyclopentenone were investigated, leading to δ‐ valerolactone or ɛ‐caprolactone as products. Conversions between 19% and 99% were obtained at a valerolactone or ɛ‐caprolactone as products. Conversions between 19% and 99% were obtained at a arctigenin [68]. the other hand, is a between valuable chemical for the obtained preparation valerolactone or ɛ‐caprolactone as products. Conversions between 19% and 99% were obtained at a δ-valerolactone or ɛ‐Caprolactone, -caprolactone ason products. Conversions 19% and 99% were at a of valerolactone or ɛ‐caprolactone as products. Conversions between 19% and 99% were obtained at a valerolactone or ɛ‐caprolactone as products. Conversions between 19% and 99% were obtained at a substrate concentration of 3 mM within 1 h. substrate concentration of 3 mM within 1 h. biodegradable polymers, such as polycaprolactone [69] and a precursor for ɛ‐caprolactam. substrate concentration of 3 mM within 1 h. substrate concentration of 3 mM within 1 h. substrate concentration of 3 mM within 1 h. substrate concentration of 3 mM within 1 h. The chemical synthesis of these compounds usually involves a large number of steps, low overall 4.2. Formation of Lactones from Acyclic Precursors 4.2. Formation of Lactones from Acyclic Precursors 4.2. Formation of Lactones from Acyclic Precursors 4.2. Formation of Lactones from Acyclic Precursors 4.2. Formation of Lactones from Acyclic Precursors yields, toxic or otherwise hazardous reagents, and impractical reaction conditions, which makes them 4.2. Formation of Lactones from Acyclic Precursors The formation form acyclic precursors a acommon strategy The formation of of lactones form acyclic precursors is is not only a common strategy in in organic neither “green” nor atom‐economic [70–73]. Hence, biocatalytic cascade transformations have The formation oflactones lactones form acyclic precursors isnot notonly only common strategy inorganic organic The formation lactones form acyclic precursors not only a common strategy organic The formation of of lactones form acyclic precursors is is not only a common common strategy in in organic The formation of lactones form acyclic precursors is not only a strategy in organic synthesis, but also takes place in the biosynthesis of many naturally occurring lactones, for instance become a useful tool in the preparation of lactones, as they avoid the necessity of time‐consuming synthesis, but also takes place in the biosynthesis of many naturally occurring lactones, for instance synthesis, but also takes place in the biosynthesis of many naturally occurring lactones, for instance synthesis, but also takes place in the biosynthesis of many naturally occurring lactones, for instance synthesis, but also takes place in the biosynthesis of many naturally occurring lactones, for instance synthesis, but also takes place in the biosynthesis of many naturally occurring lactones, for instance macrolides. These molecules are produced by by polyketide synthases (PKSs)—large multi‐enzyme and yield‐reducing isolation and purification of intermediates and reduce waste generation to a macrolides. These molecules are produced synthases (PKSs)—large multi‐enzyme macrolides. These molecules are produced bypolyketide polyketide synthases (PKSs)—large multi-enzyme macrolides. These molecules are produced polyketide synthases (PKSs)—large multi‐enzyme macrolides. These molecules are produced by by polyketide synthases (PKSs)—large multi‐enzyme macrolides. These molecules are produced by polyketide synthases (PKSs)—large multi‐enzyme complexes—from acyclic precursors that are assembled by consecutive Claisen condensations while complexes—from acyclic precursors that are assembled by consecutive Claisen condensations while minimum. complexes—from acyclic precursors that are assembled by consecutive Claisen condensations while complexes—from acyclic precursors that are assembled by consecutive Claisen condensations while complexes—from acyclic precursors that are assembled by consecutive Claisen condensations while bound to an acyl‐carrier protein and are finally cyclised by a thioesterase domain of the PKS [90,91]. In most of these multi‐enzyme sequences, the lactone is formed in the final step through bound to an acyl‐carrier protein and are finally cyclised by a thioesterase domain of the PKS [90,91]. bound to an acyl‐carrier protein and are finally cyclised by a thioesterase domain of the PKS [90,91]. bound to an acyl‐carrier protein and are finally cyclised by a thioesterase domain of the PKS [90,91]. bound to an acyl‐carrier protein and are finally cyclised by a thioesterase domain of the PKS [90,91]. The exploitation of of this biocatalytic machinery for for polyketide synthesis in in vitro has proven oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). However, systems that The exploitation this biocatalytic machinery polyketide synthesis vitro has proven The exploitation this biocatalytic machinery polyketide synthesis vitro has proven The exploitation of of this biocatalytic machinery for for polyketide synthesis in in vitro has proven The exploitation of this biocatalytic machinery for polyketide synthesis in vitro has proven challenging, but recently researchers have succeeded in producing triketide lactones via multi‐ challenging, but recently researchers have succeeded in producing triketide lactones via multi‐ derive the lactone from an acyclic precursor have also been reported. challenging, but recently researchers have succeeded producing triketide lactones via multi‐ challenging, but recently researchers have succeeded in in producing triketide lactones via multi‐ challenging, but recently researchers have succeeded in producing triketide lactones via multi‐ enzyme reactions that combine functional domains from several polyketide synthases [92]. The enzyme reactions that combine functional domains from several polyketide synthases [92]. The enzyme reactions that combine functional domains from several polyketide synthases [92]. The enzyme reactions that combine functional domains from several polyketide synthases [92]. The enzyme reactions that combine functional domains from several polyketide synthases [92]. The
Catalysts 2018, 8, 205
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complexes—from acyclic precursors that are assembled by consecutive Claisen condensations while bound to an acyl-carrier protein and are finally cyclised by a thioesterase domain of the PKS [90,91]. The exploitation of this biocatalytic machinery for polyketide synthesis in vitro has proven Catalysts 2018, 8, x FOR PEER REVIEW 17 of 23 challenging, but recently researchers have succeeded in producing triketide lactones via multi-enzyme reactions that combine functional domains from several polyketide synthases [92]. The authors authors used the malonyl‐CoA ligase from Streptomyces coelicolor for producing the extender unit 67 used the malonyl-CoA ligase from Streptomyces coelicolor for producing the extender unit 67 from from methylmalonic acid (66) and N‐acetylcysteamine (65) at the expense of stoichiometric amounts methylmalonic acid20). (66)In andparallel, N-acetylcysteamine (65) at the expense of stoichiometric amounts of ATP of ATP (Scheme an asymmetric reduction of β‐keto‐thioesters 68 by isolated (Scheme 20). Indomains parallel, of anbacterial asymmetric reduction of β-keto-thioesters 68 starter by isolated ketoreductase ketoreductase PKSs was performed to furnish the units for the PKS‐ domains of bacterial PKSs was performed to furnish the starter units for the PKS-catalysed Claisen catalysed Claisen condensation. The crude reaction mixtures obtained from the two condensation. The crude reaction mixtures obtained from the two biotransformations were then biotransformations were then combined and supplemented with the terminal PKS module combined and supplemented with the terminal PKS module (consisting of acyl carrier protein, acyl (consisting of acyl carrier protein, acyl transferase, ketoreductase, and ketosynthase domains) fused transferase, ketoreductase, and ketosynthase fused to the thioesterase of the erythromycin to the thioesterase of the erythromycin PKS domains) from Saccharopolyspora erythraea. This “minimal PKS” PKS from Saccharopolyspora erythraea. This “minimal PKS” catalysed the Claisen condensation of 67 catalysed the Claisen condensation of 67 and 69 as well as the reduction of the resulting ketone and and 69 as well as the reduction of the resulting ketone and the final cyclization to the product lactone the final cyclization to the product lactone 70. Although the isolated yields of the overall sequence 70. Although the13%, isolated of the overall sequence did not 13%,amounts this method allowed the did not exceed this yields method allowed the preparation of exceed substantial of the triketide preparation of substantial of the triketideThe lactones 70 (3.4–773‐ketolactones mg) as single stereoisomers. lactones 70 (3.4–77 mg) as amounts single stereoisomers. corresponding could also be The corresponding 3-ketolactones could also be accessed by isolating intermediate 69 and performing accessed by isolating intermediate 69 and performing the final biotransformation in the absence of the final biotransformation in the absence of an NADPH regeneration system. an NADPH regeneration system.
Scheme 20. Synthesis of triketide lactones 70 via coupling of enzymatically prepared precursors 67 Scheme 20. Synthesis of triketide lactones 70 via coupling of enzymatically prepared precursors 67 and 69 by a polyketide synthase (PKS). and 69 by a polyketide synthase (PKS).
Another study aimed at the synthesis of chiral lactones from acyclic precursors relied on Another study aimed at the synthesis of chiral lactones from acyclic precursors relied spontaneous ring closure and used ene‐reductase YqjM from Bacillus subtilis and alcohol on spontaneous ring closure and used ene-reductase YqjM from Bacillus subtilis and alcohol dehydrogenases from different microbial sources for controlling the formation of up to three dehydrogenases from different microbial sources for controlling the formation of up to three contiguous contiguous stereogenic centres (Scheme 21) [93]. stereogenic centres (Scheme 21) [93]. In the first step of the synthetic sequence, (E)- or (Z)-oxo-esters 71 were reduced by YqjM—a reaction that proceeded with varying stereochemical outcomes: While both double bond isomers of substrate 71a (R1 = H, R2 = Me, R3 = Et) afforded the same product (R)-72a and only the (E)-isomer of substrate 71c (R1 , R2 = Me, R3 = Et) was converted, substrate 71b (R1 = Me, R2 = H, R3 = Et) displayed an E/Z-dependent switch in selectivity. The (E)-isomer was reduced to (S)-72b, while the (Z)-isomer gave the (R)-enantiomer, and in both cases optically pure products (ee > 99%) were obtained. The subsequent reduction of intermediates 72 catalysed by alcohol dehydrogenases from Lactobacillus kefir (Lk-ADH), Lactobacillus brevis (Lb-ADH), Thermoanaerobacter sp. (ADH-T), or from
Scheme 21. Two‐step cascade leading to substituted γ‐butyrolactones (74) using an ene‐reductase
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Catalysts 2018, 8, 205
Scheme 20. Synthesis of triketide lactones 70 via coupling of enzymatically prepared precursors 67 and 69 by a polyketide synthase (PKS).
a commercial supplier (evocatal, evo-1.1.030) was more predictable, proceeding with the expected selectivity in all cases. The at ethyl 73a–c spontaneous cyclisation to therelied desired Another study aimed the esters synthesis of underwent chiral lactones from acyclic precursors on lactones 74a–c,ring whileclosure the reaction a tert-butyl ester the hydroxyacid stage (73d). spontaneous and employing used ene‐reductase YqjM stopped from at Bacillus subtilis and alcohol All products werefrom easilydifferent isolated by extraction and purified by columnthe chromatography. The to isolated dehydrogenases microbial sources for controlling formation of up three yields and optical purities are summarised in Table 9. contiguous stereogenic centres (Scheme 21) [93].
Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW
18 of 23 18 of 23 18 of 23 18 of 23 18 of 23 18 of 23
In the first step of the synthetic sequence, (E)‐ or (Z)‐oxo‐esters 71 were reduced by YqjM—a In the first step of the synthetic sequence, (E)‐ or (Z)‐oxo‐esters 71 were reduced by YqjM—a In the first step of the synthetic sequence, (E)‐ or (Z)‐oxo‐esters 71 were reduced by YqjM—a In the first step of the synthetic sequence, (E)‐ or (Z)‐oxo‐esters 71 were reduced by YqjM—a In the first step of the synthetic sequence, (E)‐ or (Z)‐oxo‐esters 71 were reduced by YqjM—a In the first step of the synthetic sequence, (E)‐ or (Z)‐oxo‐esters 71 were reduced by YqjM—a reaction that proceeded with varying stereochemical outcomes: While both double bond isomers of reaction that proceeded with varying stereochemical outcomes: While both double bond isomers of reaction that proceeded with varying stereochemical outcomes: While both double bond isomers of reaction that proceeded with varying stereochemical outcomes: While both double bond isomers of reaction that proceeded with varying stereochemical outcomes: While both double bond isomers of reaction that proceeded with varying stereochemical outcomes: While both double bond isomers of 11111111 = H, R 22222222 = Me, R 33333333 = Et) afforded the same product (R)‐72a and only the (E)‐isomer of substrate 71a (R = H, R = Me, R = Et) afforded the same product (R)‐72a and only the (E)‐isomer of substrate 71a (R = H, R = Me, R = Et) afforded the same product (R)‐72a and only the (E)‐isomer of substrate 71a (R 1 = H, R 2 = Me, R 2 = Me, R 3 = Et) afforded the same product (R)‐72a and only the (E)‐isomer of 3 = Et) afforded the same product (R)‐72a and only the (E)‐isomer of substrate 71a (R1 = H, R = H, R = Me, R = Et) afforded the same product (R)‐72a and only the (E)‐isomer of substrate 71a (R substrate 71a (R 11111, R 22222 = Me, R 33333 = Et) was converted, substrate 71b (R 1 2 3 11111111 = Me, R 22222222 = H, R 33333333 = Et) displayed substrate 71c (R , R = Me, R = Et) was converted, substrate 71b (R = Me, R = H, R = Et) displayed substrate 71c (R = Me, R = H, R = Et) displayed 111, R 222 = Me, R 333 = Et) was converted, substrate 71b (R substrate 71c (R 1 = Me, R 2 = H, R 2 = H, R 3 = Et) displayed 3 = Et) displayed substrate 71c (R1, R , R2 = Me, R = Me, R3 = Et) was converted, substrate 71b (R = Et) was converted, substrate 71b (R1 = Me, R = Me, R = H, R = Et) displayed substrate 71c (R , R = Me, R = Et) was converted, substrate 71b (R substrate 71c (R an E/Z‐dependent switch in selectivity. The (E)‐isomer was reduced to (S)‐72b, while the (Z)‐isomer an E/Z‐dependent switch in selectivity. The (E)‐isomer was reduced to (S)‐72b, while the (Z)‐isomer an E/Z‐dependent switch in selectivity. The (E)‐isomer was reduced to (S)‐72b, while the (Z)‐isomer an E/Z‐dependent switch in selectivity. The (E)‐isomer was reduced to (S)‐72b, while the (Z)‐isomer an E/Z‐dependent switch in selectivity. The (E)‐isomer was reduced to (S)‐72b, while the (Z)‐isomer an E/Z‐dependent switch in selectivity. The (E)‐isomer was reduced to (S)‐72b, while the (Z)‐isomer gave the (R)‐enantiomer, and the (R)‐enantiomer, and in in both both cases cases optically optically pure pure products products (ee > 99%) were (ee > 99%) were obtained. obtained. The The gave the (R)‐enantiomer, and in both cases optically pure products (ee > 99%) were obtained. The gave gave the (R)‐enantiomer, and in both cases optically pure products (ee > 99%) were obtained. The gave the (R)‐enantiomer, and in both cases optically pure products (ee > 99%) were obtained. The gave the (R)‐enantiomer, and in both cases optically pure products (ee > 99%) were obtained. The subsequent reduction of intermediates 72 catalysed by alcohol dehydrogenases from Lactobacillus kefir subsequent reduction of intermediates 72 catalysed by alcohol dehydrogenases from Lactobacillus kefir subsequent reduction of intermediates 72 catalysed by alcohol dehydrogenases from Lactobacillus kefir subsequent reduction of intermediates 72 catalysed by alcohol dehydrogenases from Lactobacillus kefir subsequent reduction of intermediates 72 catalysed by alcohol dehydrogenases from Lactobacillus kefir subsequent reduction of intermediates 72 catalysed by alcohol dehydrogenases from Lactobacillus kefir (Lk‐ADH), Lactobacillus Lactobacillus brevis brevis (Lb‐ADH), (Lb‐ADH), Thermoanaerobacter Thermoanaerobacter sp. sp. (ADH‐T), (ADH‐T), or or from from a a commercial commercial (Lk‐ADH), Lactobacillus brevis (Lb‐ADH), Thermoanaerobacter sp. (ADH‐T), or from a commercial (Lk‐ADH), (Lk‐ADH), Lactobacillus brevis (Lb‐ADH), Thermoanaerobacter sp. (ADH‐T), or from a commercial (Lk‐ADH), Lactobacillus brevis (Lb‐ADH), Thermoanaerobacter sp. (ADH‐T), or from commercial (Lk‐ADH), Lactobacillus brevis (Lb‐ADH), Thermoanaerobacter sp. (ADH‐T), or from a a commercial supplier (evocatal, evo‐1.1.030) was more predictable, proceeding with the expected selectivity in all supplier (evocatal, evo‐1.1.030) was more predictable, proceeding with the expected selectivity in all supplier (evocatal, evo‐1.1.030) was more predictable, proceeding with the expected selectivity in all supplier (evocatal, evo‐1.1.030) was more predictable, proceeding with the expected selectivity in all supplier (evocatal, evo‐1.1.030) was more predictable, proceeding with the expected selectivity in all supplier (evocatal, evo‐1.1.030) was more predictable, proceeding with the expected selectivity in all cases. The ethyl esters 73a–c underwent spontaneous cyclisation to the desired lactones 74a–c, while cases. The ethyl esters 73a–c underwent spontaneous cyclisation to the desired lactones 74a–c, while cases. The ethyl esters 73a–c underwent spontaneous cyclisation to the desired lactones 74a–c, while cases. The ethyl esters 73a–c underwent spontaneous cyclisation to the desired lactones 74a–c, while cases. The ethyl esters 73a–c underwent spontaneous cyclisation to the desired lactones 74a–c, while cases. The ethyl esters 73a–c underwent spontaneous cyclisation to the desired lactones 74a–c, while the reaction employing a tert‐butyl ester stopped at the hydroxyacid stage (73d). All products were the reaction employing a tert‐butyl ester stopped at the hydroxyacid stage (73d). All products were the reaction employing a tert‐butyl ester stopped at the hydroxyacid stage (73d). All products were the reaction employing a tert‐butyl ester stopped at the hydroxyacid stage (73d). All products were Scheme 21. 21. Two‐step cascade leading leading to to substituted substituted γ-butyrolactones γ‐butyrolactones (74) (74) using using an an ene-reductase ene‐reductase the reaction employing a tert‐butyl ester stopped at the hydroxyacid stage (73d). All products were the reaction employing a tert‐butyl ester stopped at the hydroxyacid stage (73d). All products were Scheme Two-step cascade easily isolated by extraction and purified by column chromatography. The isolated yields and optical easily isolated by extraction and purified by column chromatography. The isolated yields and optical easily isolated by extraction and purified by column chromatography. The isolated yields and optical (ERED) and an alcohol dehydrogenase (ADH) for controlling up to three adjacent stereogenic centres. easily isolated by extraction and purified by column chromatography. The isolated yields and optical easily isolated by extraction and purified by column chromatography. The isolated yields and optical (ERED) and an alcohol dehydrogenase (ADH) for controlling up to three adjacent stereogenic centres. easily isolated by extraction and purified by column chromatography. The isolated yields and optical purities are summarised in Table 9. purities are summarised in Table 9. purities are summarised in Table 9. purities are summarised in Table 9. purities are summarised in Table 9. purities are summarised in Table 9. Table 9. Results of the two-step biocatalytic synthesis of substituted γ-butyrolactones (74; Scheme 21) a . aaaaaaaa. Table 9. Results of the two‐step biocatalytic synthesis of substituted γ‐butyrolactones (74; Scheme 21) Table 9. Results of the two‐step biocatalytic synthesis of substituted γ‐butyrolactones (74; Scheme 21) . . . Table 9. Results of the two‐step biocatalytic synthesis of substituted γ‐butyrolactones (74; Scheme 21) a. a. Table 9. Results of the two‐step biocatalytic synthesis of substituted γ‐butyrolactones (74; Scheme 21) Table 9. Results of the two‐step biocatalytic synthesis of substituted γ‐butyrolactones (74; Scheme 21) Table 9. Results of the two‐step biocatalytic synthesis of substituted γ‐butyrolactones (74; Scheme 21) c bb b Substrate Product Yield ee (%) de (%) de (%) ADH b b c (%) Substrate ADH b Product Yield ccccccc(%) (%) ee (%) ee (%) de (%) Substrate ADH Product Yield ee (%) b b b Substrate ADH Product Yield (%) de (%)
Substrate Substrate Substrate
ADH b b ADH ADH
Product Product Product
c (%) Yield c (%) (%) ee (%) ee (%) de (%) de (%) Yield ee (%) de (%) Yield
ADH‐T ADH‐T ADH-T ADH‐T ADH‐T ADH‐T ADH‐T
90 90 90 90 90 90 90
>99 >99 >99 >99 >99 >99 >99
>99 >99 >99 >99 >99 >99 >99
Lk‐ADH Lk‐ADH Lk-ADH Lk‐ADH Lk‐ADH Lk‐ADH Lk‐ADH
80 80 80 80 80 80 80
>99 >99 >99 >99 >99 >99 >99
>99 >99 >99 >99 >99 >99 >99
evo‐1.1.030 evo‐1.1.030 evo‐1.1.030 evo-1.1.030 evo‐1.1.030 evo‐1.1.030 evo‐1.1.030
82 82 82 82 82 82 82
>99 >99 >99 >99 >99 >99 >99
>99 >99 >99 >99 >99 >99 >99
90 90 90 90 90 90 90
>99 >99 >99 >99 >99 >99 >99
>99 >99 >99 >99 >99 >99 >99
63 63 63 63 63 63 63
98 98 98 98 98 98 98
>99 >99 >99 >99 >99 >99 >99
50 50 50 50 50 50
98 98 98 98 98 98
>99 >99 >99 >99 >99 >99
Lk‐ADH Lk‐ADH Lk‐ADH Lk‐ADH Lk‐ADH Lk-ADH Lk‐ADH
evo‐1.1.030 evo‐1.1.030 evo‐1.1.030 evo‐1.1.030 evo‐1.1.030 evo‐1.1.030 evo-1.1.030
Lk‐ADH Lk‐ADH Lk‐ADH Lk‐ADH Lk‐ADH Lk‐ADH
Lk‐ADH Lk‐ADH Lk‐ADH Lk‐ADH Catalysts 2018, 8, 205
>99 >99 >99 >99
>99 >99 >99 >99
evo‐1.1.030 evo‐1.1.030 evo‐1.1.030 evo‐1.1.030 Substrate
90 90 90 90
ADH b
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Table 9. Cont. Product
63 63 63 63 Yield c (%)
Lk‐ADH Lk‐ADH Lk-ADH Lk‐ADH Lk‐ADH
98 98 98 98 ee (%)
>99 >99 >99 >99 de (%)
50 50 50 50 50
98 98 98 98 98
>99 >99 >99 >99 >99
70 70 70 70 70
>99 >99 >99 >99 >99
>99 >99 >99 >99 >99
ADH‐T ADH‐T ADH‐T ADH‐T ADH-T Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW Catalysts 2018, 8, x FOR PEER REVIEW
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Lb‐ADH Lb‐ADH Lb-ADH Lb‐ADH Lb‐ADH Lb‐ADH
62 62 62 62 62 62
>99 >99 >99 >99 >99 >99
98 98 98 98 98 98
75 75 75 75 75 75
>99 >99 >99 >99 >99 >99
>99 >99 >99 >99 >99 >99
85 85 85 85 85 85
>99 >99 >99 >99 >99 >99
>99 >99 >99 >99 >99 >99
evo‐1.1.030 evo‐1.1.030 evo‐1.1.030 evo‐1.1.030 evo-1.1.030 evo‐1.1.030
Lk‐ADH Lk‐ADH Lk‐ADH Lk‐ADH Lk‐ADH Lk-ADH
+++ (0.67 + (0.67 Reaction conditions: Substrate 71 (67 mM), D‐glucose ‐glucose (250 mM), NADP mM), GDH (0.067 Reaction conditions: Substrate 71 (67 mM), D (250 mM), NADP mM), GDH (0.067 +(0.67 + (0.67 Reaction conditions: Substrate 71 (67 mM), D‐glucose ‐glucose (250 mM), NADP mM), GDH (0.067 Reaction conditions: Substrate 71 (67 mM), D (250 mM), NADP mM), GDH (0.067 + NADP Reaction Substrate mM), D (250 mM), (0.67 mM), (0.067 D‐glucose Reactionconditions: conditions: Substrate 71 71 (67 (67 mM), D -glucose (250 mM), NADP (0.67 mM), GDH (0.067GDH U/mL), ERED U/mL), ERED (0.167 U/mL; purified enzyme), ADH (0.73–1.67 U/mL; cell free extract), phosphate U/mL), ERED (0.167 U/mL; purified enzyme), ADH (0.73–1.67 U/mL; cell free extract), phosphate U/mL), ERED (0.167 U/mL; purified enzyme), ADH (0.73–1.67 U/mL; cell free extract), phosphate U/mL), (0.167 U/mL; purified ADH (0.73–1.67 U/mL; cell free extract), phosphate (0.167ERED U/mL; purified enzyme), ADHenzyme), (0.73–1.67 U/mL; cell free extract), phosphate buffer (100 mM, pH 7.0), U/mL), ERED (0.167 U/mL; purified enzyme), ADH (0.73–1.67 U/mL; cell free extract), phosphate bbb ADH‐T, alcohol dehydrogenase from Thermoanaerobacter sp.; buffer (100 mM, pH 7.0), 30 °C, 24 h. ADH‐T, alcohol dehydrogenase from Thermoanaerobacter sp.; 30 ◦ C, 24 h. b ADH-T, alcohol dehydrogenase from Thermoanaerobacter sp.; Lb-ADH, alcohol dehydrogenase buffer (100 mM, pH 7.0), 30 °C, 24 h. bb ADH‐T, alcohol dehydrogenase from Thermoanaerobacter sp.; b ADH‐T, alcohol dehydrogenase from Thermoanaerobacter sp.; buffer (100 mM, pH 7.0), 30 °C, 24 h. ADH‐T, alcohol dehydrogenase from Thermoanaerobacter sp.; buffer (100 mM, pH 7.0), 30 °C, 24 h. buffer (100 mM, pH 7.0), 30 °C, 24 h. from Lactobacillus brevis.; Lk-ADH, alcohol dehydrogenase from Lactobacillus kefir; evo-1.1.030, commercial alcohol Lb‐ADH, alcohol dehydrogenase from Lactobacillus brevis.; Lk‐ADH, alcohol dehydrogenase from Lb‐ADH, alcohol dehydrogenase from Lactobacillus brevis.; Lk‐ADH, alcohol dehydrogenase from Lb‐ADH, alcohol dehydrogenase from Lactobacillus brevis.; Lk‐ADH, alcohol dehydrogenase from Lb‐ADH, alcohol dehydrogenase from Lactobacillus brevis.; Lk‐ADH, alcohol dehydrogenase from Lb‐ADH, alcohol dehydrogenase from Lactobacillus brevis.; Lk‐ADH, alcohol dehydrogenase from dehydrogenase from evocatal. c Isolated yields after column chromatography. c c cc Isolated yields after Isolated yields after Lactobacillus kefir; evo‐1.1.030, commercial alcohol dehydrogenase from evocatal. Lactobacillus kefir; evo‐1.1.030, commercial alcohol dehydrogenase from evocatal. cc Isolated yields after Isolated yields after Lactobacillus kefir; evo‐1.1.030, commercial alcohol dehydrogenase from evocatal. Isolated yields after Lactobacillus kefir; evo‐1.1.030, commercial alcohol dehydrogenase from evocatal. Lactobacillus kefir; evo‐1.1.030, commercial alcohol dehydrogenase from evocatal. column chromatography. column chromatography. column chromatography. column chromatography. column chromatography. aaa a a a a
In a later study, the cascade was extended, starting from allylic cyclic alcohols using fusion proteins; however, conversions did not exceed 34% [94].from In a a later study, the cascade was extended, starting from allylic cyclic alcohols using fusion In a later study, the cascade was extended, starting allylic cyclic alcohols using fusion In a later study, the cascade was extended, starting from allylic cyclic alcohols using fusion In a later study, the cascade was extended, starting from allylic cyclic alcohols using fusion In later study, the cascade was extended, starting from allylic cyclic alcohols using fusion proteins; however, conversions did not exceed 34% [94]. proteins; however, conversions did not exceed 34% [94]. proteins; however, conversions did not exceed 34% [94]. proteins; however, conversions did not exceed 34% [94]. proteins; however, conversions did not exceed 34% [94]. 5. Conclusions
5. Conclusions 5. Conclusions Cascade reactions possess the advantage of circumventing the need of isolation of reaction 5. Conclusions 5. Conclusions 5. Conclusions intermediates, which saves resources, reagents, and time. They may also minimize the risk of undesired Cascade reactions possess the advantage of circumventing the need of isolation of reaction Cascade reactions possess the advantage of circumventing the need of isolation of reaction Cascade reactions possess the advantage of circumventing the need of isolation of reaction Cascade reactions possess the advantage of circumventing the need of isolation of reaction reactions possess the advantage of circumventing the need of isolation of reaction sideCascade reactions of unstable intermediates. Furthermore, the cascade approach is expected to lead to intermediates, which saves resources, reagents, and time. They may also minimize the risk of of intermediates, which saves resources, reagents, and time. They may also minimize the risk of intermediates, which saves resources, reagents, and time. They may also minimize the risk intermediates, which saves resources, reagents, and time. They may also minimize the risk of intermediates, which saves reagents, and time. They may also minimize the risk higher yields compared to a resources, classical sequence of single-step transformations and at the same time of can undesired side reactions of unstable intermediates. Furthermore, the cascade approach is expected to undesired side reactions of unstable intermediates. Furthermore, the cascade approach is expected to undesired side reactions of unstable intermediates. Furthermore, the cascade approach is expected to undesired side reactions of unstable intermediates. Furthermore, the cascade approach is expected to undesired side reactions of unstable intermediates. Furthermore, the cascade approach is expected to increase the synthetic efficiency by reducing operational work-up steps and resources. Consequently, lead to higher yields compared to a classical sequence of single‐step transformations and at the same lead to higher yields compared to a classical sequence of single‐step transformations and at the same lead to higher yields compared to a classical sequence of single‐step transformations and at the same lead to higher yields compared to a classical sequence of single‐step transformations and at the same lead to higher yields compared to a classical sequence of single‐step transformations and at the same cascades enable to reduce the amount of waste, due to minimization of the amount of chemicals used time can increase the synthetic efficiency by reducing operational work‐up steps and resources. time can increase the synthetic efficiency by reducing operational work‐up steps and resources. time can increase the synthetic efficiency by reducing operational work‐up steps and resources. time can increase the synthetic efficiency by reducing operational work‐up steps and resources. time the synthetic efficiency by reducing operational work‐up steps and resources. (e.g.,can by increase circumventing work-up). Consequently, cascades enable to reduce the amount of waste, due to minimization of the amount of Consequently, cascades enable to reduce the amount of waste, due to minimization of the amount of Consequently, cascades enable to reduce the amount of waste, due to minimization of the amount of Consequently, cascades enable to reduce the amount of waste, due to minimization of the amount of Consequently, cascades enable to reduce the amount of waste, due to minimization of the amount of The cascades discussed in this review represent a fraction of possible artificial biocatalytic cascades chemicals used (e.g., by circumventing work‐up). chemicals used (e.g., by circumventing work‐up). chemicals used (e.g., by circumventing work‐up). chemicals used (e.g., by circumventing work‐up). chemicals used (e.g., by circumventing work‐up). [1ac], of which the number will significantly increase during the next years. This will be a result of The cascades discussed in this review represent a a fraction of possible artificial biocatalytic The cascades discussed in this review represent a fraction of possible artificial biocatalytic The cascades discussed in this review represent a fraction of possible artificial biocatalytic The cascades discussed in this review represent a fraction of possible artificial biocatalytic The cascades discussed in this review represent fraction of possible artificial (novel) enzymes becoming more easily available, improved expression tools, as well biocatalytic as improved cascades [1ac], of which the number will significantly increase during the next years. This will be a cascades [1ac], of which the number will significantly increase during the next years. This will be a cascades [1ac], of which the number will significantly increase during the next years. This will be a cascades [1ac], of which the number will significantly increase during the next years. This will be a cascades [1ac], of which the number will significantly increase during the next years. This will be a enzyme engineering methods. result of (novel) enzymes becoming more easily available, improved expression tools, as well as result of (novel) enzymes becoming more easily available, improved expression tools, as well as result of (novel) enzymes becoming more easily available, improved expression tools, as well as result of (novel) enzymes becoming more easily available, improved expression tools, as well as result of (novel) enzymes becoming more easily available, improved expression tools, as well as This review shows that artificial cascades may can use different feedstocks as substrates: either improved enzyme engineering methods. improved enzyme engineering methods. improved enzyme engineering methods. improved enzyme engineering methods. improved enzyme engineering methods. from renewables such as amino acids but also from fossil resources, such as phenol or styrenes, etc. This review shows that artificial cascades may can use different feedstocks as substrates: either This review shows that artificial cascades may can use different feedstocks as substrates: either This review shows that artificial cascades may can use different feedstocks as substrates: either This review shows that artificial cascades may can use different feedstocks as substrates: either This review shows that artificial cascades may can use different feedstocks as substrates: either from renewables such as amino acids but also from fossil resources, such as phenol or styrenes, etc. from renewables such as amino acids but also from fossil resources, such as phenol or styrenes, etc. from renewables such as amino acids but also from fossil resources, such as phenol or styrenes, etc. from renewables such as amino acids but also from fossil resources, such as phenol or styrenes, etc. from renewables such as amino acids but also from fossil resources, such as phenol or styrenes, etc. The target compounds discussed in the review, namely hydroxy acids, amino acids, and lactones The target compounds discussed in the review, namely hydroxy acids, amino acids, and lactones The target compounds discussed in the review, namely hydroxy acids, amino acids, and lactones The target compounds discussed in the review, namely hydroxy acids, amino acids, and lactones The target compounds discussed in the review, namely hydroxy acids, amino acids, and lactones represent important building blocks and intermediates. The cascades shown enabled the successful represent important building blocks and intermediates. The cascades shown enabled the successful represent important building blocks and intermediates. The cascades shown enabled the successful represent important building blocks and intermediates. The cascades shown enabled the successful represent important building blocks and intermediates. The cascades shown enabled the successful preparation of these compounds within 2–10 artificially combined steps. preparation of these compounds within 2–10 artificially combined steps. preparation of these compounds within 2–10 artificially combined steps. preparation of these compounds within 2–10 artificially combined steps. preparation of these compounds within 2–10 artificially combined steps. A A number of cascades have already been described to be performed at elevated substrate A number of cascades have already been described to be performed at elevated substrate A number of cascades have already been described to be performed at elevated substrate A number of cascades have already been described to be performed at elevated substrate number of cascades have already been described to be performed at elevated substrate
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The target compounds discussed in the review, namely hydroxy acids, amino acids, and lactones represent important building blocks and intermediates. The cascades shown enabled the successful preparation of these compounds within 2–10 artificially combined steps. A number of cascades have already been described to be performed at elevated substrate concentration, e.g., reaching in the best case e.g., 600 mM as reported in this review and are therefore ideally suited for preparative transformations and applications; however, in other cases the substrate concentration is as low as 1 mM, which is due to the limitation of the most sensitive enzyme in the cascade. Thus, a cascade can only be as good in terms of efficiency (space time yield) as is given by the “weakest” enzyme. Limiting reactions are still hydroxylation transformations of C–H bonds but also cross-inhibition by products/substrates of various steps may force to keep concentrations low. Therefore, there is still a need for further improved enzymes. Another point which would be desirable is that co-expression constructs for various cascades may be deposited and made broadly available for subsequent studies. This may allow to generate the possibility to design rather fast novel complex networks including the now designed and optimized cascades. Acknowledgments: We gratefully acknowledge the Federal Ministry for Digital and Economic Affairs (bmwd), the Federal Ministry for Transport, Innovation and Technology (bmvit), the Styrian Business Promotion Agency SFG, the Standortagentur Tirol, Government of Lower Austria and ZIT—Technology Agency of the City of Vienna through the COMET-Funding Program managed by the Austrian Research Promotion Agency FFG. Conflicts of Interest: The authors declare no conflict of interest.
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42a 89 >99% Table 6. Transformation of β‐keto esters 42 into β‐amino acids 44 (Scheme 12) a. 42b 96 >99% 42c 75 >99% Substrate Conv. (%) ee (%) 42d 73 >99% 42a 89 >99% 42e 99 >99% 42b 96 >99% 42f 61 >99% 23 of 24 Catalysts 2018, 8, 205 42c 75 >99% 42g 47 >99% 42d 73 >99% 42h 41 >99% 42e 99 >99% 42i of L-tyrosine 26 derivatives >99% from 60. Dennig, A.; Busto, E.; Kroutil, K. Biocatalytic 42f W.; Faber,61 >99% one-pot synthesis a Reaction conditions: Substrate 42 (50 mM), (S)‐1‐phenylethylamine (150 mM), PLP (1 mM monosubstituted benzenes, 42g pyruvate, and ACS Catal. 2015, 5, 7503–7506. [CrossRef] 47 ammonia. >99% D.J. 61. Seebach, D.; Beck, A.K.; Bierbaum, 42h (30 mg/mL), TA (20 mg/mL), Tris‐HCl buffer (100 mM, pH 8.0), DMSO (15% v/v), 37 °C, 24 h 41 The world >99% of β-and γ-peptides comprised of homologated 42i other components. 26 >99% Biodivers. 2004, 1, 1111–1239. 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Bioeng. 2017, 114, 1215–1221. become a useful tool in the preparation of lactones, as they avoid the necessity of time‐consuming In most of these multi‐enzyme sequences, the lactone is formed in the final s [CrossRef] [PubMed] and yield‐reducing isolation and purification of intermediates and reduce waste generation to a oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). However, s 78. Opperman, D.J.; Reetz, M.T. Towards practical Baeyer–Villiger-monooxygenases: Design of cyclohexanone minimum. derive the lactone from an acyclic precursor have also been reported. monooxygenase mutants with enhancedthe oxidative stability. ChemBioChem 2010, 11, 2589–2596. In most of these multi‐enzyme sequences, lactone is formed in the final step through [CrossRef] [PubMed] oxidation of a cyclic ketone by a Baeyer–Villiger monooxygenase (BVMO). However, systems that 79. Kohl, A.; Srinivasamurthy, V.; Böttcher, D.; Kabisch, J.; Bornscheuer, U.T. Co-expression of an alcohol derive the lactone from an acyclic precursor have also been reported. dehydrogenase and a cyclohexanone monooxygenase for cascade reactions facilitates the regeneration of the NADPH cofactor. Enzyme Microb. Technol. 2018, 108, 53–58. [CrossRef] [PubMed] 80. Aalbers, F.S.; Fraaije, M.W. Coupled reactions by coupled enzymes: Alcohol to lactone cascade with alcohol dehydrogenase–cyclohexanone monooxygenase fusions. Appl. Microbiol. Biotechnol. 2017, 101, 7557–7565. [CrossRef] [PubMed]
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