Journal of Physics Communications
ACCEPTED MANUSCRIPT • OPEN ACCESS
Building phase synchronization equivalence between coupled bursting neurons and phase oscillators To cite this article before publication: Fabiano Ferrari et al 2018 J. Phys. Commun. in press https://doi.org/10.1088/2399-6528/aaa853
Manuscript version: Accepted Manuscript Accepted Manuscript is “the version of the article accepted for publication including all changes made as a result of the peer review process, and which may also include the addition to the article by IOP Publishing of a header, an article ID, a cover sheet and/or an ‘Accepted Manuscript’ watermark, but excluding any other editing, typesetting or other changes made by IOP Publishing and/or its licensors” This Accepted Manuscript is © 2018 The Author(s). Published by IOP Publishing Ltd.
As the Version of Record of this article is going to be / has been published on a gold open access basis under a CC BY 3.0 licence, this Accepted Manuscript is available for reuse under a CC BY 3.0 licence immediately. Everyone is permitted to use all or part of the original content in this article, provided that they adhere to all the terms of the licence https://creativecommons.org/licences/by/3.0 Although reasonable endeavours have been taken to obtain all necessary permissions from third parties to include their copyrighted content within this article, their full citation and copyright line may not be present in this Accepted Manuscript version. Before using any content from this article, please refer to the Version of Record on IOPscience once published for full citation and copyright details, as permissions may be required. All third party content is fully copyright protected and is not published on a gold open access basis under a CC BY licence, unless that is specifically stated in the figure caption in the Version of Record. View the article online for updates and enhancements.
This content was downloaded from IP address 191.101.66.91 on 18/01/2018 at 01:10
AUTHOR SUBMITTED MANUSCRIPT - JPCO-100523.R1
Fabiano A. S. Ferrari
us cri
Building phase synchronization equivalence between coupled bursting neurons and phase oscillators Universidade Federal dos Vales do Jequitinhonha e Mucuri, Instituto de Engenharia, Ciˆencia e Tecnologia, Jana´ uba/MG, 39440-000, BR E-mail:
[email protected]
an
Ricardo L. Viana
Universidade Federal do Paran´ a, Departamento de F´ısica, Curitiba/PR, 81531-980, BR November 2017
pte
dM
Abstract. Bursting neurons are characterized by an alternation of active and inactive state, during the active state they exhibit train of spikes and quiescent behavior in the inactive state. When bursting neurons are coupled they can synchronize depending on the coupling strength. If the coupling strength is increased above a critical value, a transition from an asynchronous state to a partial synchronized state can be observed. This transition has the same type observed in coupled Kuramoto oscillators. When the natural frequency distribution of the oscillators is properly defined, the bursting neurons and the Kuramoto oscillators describe the same phase transition for synchronization.
1. Introduction
ce
Bursting activity is observed in many neuronal firing patterns, it consist of an alternation between active and inactive state. During the active state bursting neurons show train of spikes and in the inactive state they are silent [1, 2]. When bursting neurons are coupled, depending on topology and coupling strength, they can exhibit phase synchronization. Phase synchronization is observed at experiments in vitro and numerical simulations [3, 4, 5]. To explain the emergence of phase synchronization a model of coupled phase oscillators was proposed by Kuramoto [6]. In the Kuramoto model, phase linear oscillators are coupled through a nonlinear term. To determine phase synchronization is defined an order parameter, called Kuramoto Order Parameter. When the Kuramoto Order Parameter is 1 means all oscillators are synchronized in phase and when the oscillators are not synchronized to each other the order parameter is 0. For this model, depending on frequency distribution, the critical value where the transition from
Ac
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
pt
Page 1 of 7
AUTHOR SUBMITTED MANUSCRIPT - JPCO-100523.R1
pt
2
us cri
asynchronous state to partial synchronized state happens can be determined analytically [7]. The observed phase synchronization profile for coupled bursting neurons are similar to those observed in Kuramoto oscillators. Our analysis show that if the frequency distribution of Kuramoto oscillators is properly defined, then both models can describe the same phase synchronization transition [8]. In this paper, we describe in details the method to generate such equivalence. 2. Rulkov Model
One simple model to describe neuronal bursting is the Rulkov model. It is a two dimensional map described by [9]: xn+1 = α/(1 + x2n ) + yn ,
(1)
an
yn+1 = yn − η(xn − σ),
(2)
pte
dM
where η = 0.001 and σ = −1 are fixed parameters and α is the bifurcation parameter [9]. Different values of α result in different dynamical behaviors. One example of the bursting oscillations produced by this model is shown in the Figure 1. For the Rulkov model a burst starts when the y-variable reaches its maximum value. Considering the maximum value of the y-variable we can define a phase ϕ, such that [10] (n − nk ) , (3) ϕn = 2πk + 2π (nk+1 − nk ) where nk is the initial time of the k-th burst, nk = y(k-th maximum point). The correspondence between this phase transformation and the burst oscillations is shown in the Figure 1 (red line). 2
2
1
xn
1
0
0
-1
ce -3 88000
cos( θ )
-1
-2
Ac
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
Page 2 of 7
n
-2 90000
Figure 1. Example of bursting oscillations and its associated phase produced by the Rulkov model. Black color represents the time series of the x variable (left side axis in the graph) and red color the cosine of the associated phase (right side axis in the graph). This time series was produced after 88000 transient iterations, here α = 4.2.
The average bursting frequency Ω can be defined as ϕn ′ − ϕ0 Ω= , n′
(4)
Page 3 of 7
pt
3
us cri
where n′ is the time series length, the equation (4) is a good approximation for regular bursting. The bursting frequency Ω increases linearly with parameter α, when it is varied from 4.1 to 4.3, as shown in Figure 2. 0.035
0.03
Ω 0.025
0.015 4.1
4.15
an
0.02
4.2
α
4.25
4.3
dM
Figure 2. Average bursting frequency Ω as function of parameter α. The average was calculated over 100 distinct initial conditions and 10 000 iterations were considered (after 80 000 transient iterations).
3. Generalized Kuramoto Model
pte
The original version of the Kuramoto model describes globally coupled phase oscillators [6] N dθi ε X = ωi + sin(θj − θi ), dt N j=1
(5)
ce
where i = 1, ..., N , and N is the network size. The parameter ωi is the natural frequency and ε is the coupling strength. A more powerful version of the Kuramoto model is called: Generalized Kuramoto model [11]. This version allow us to study phase synchronization of different network topologies N X dθi = ωi + ε Aij sin(θj − θi ), dt j=1
(6)
where Aij is the connection matrix. When the natural frequencies ωi obey a symmetric and unimodal frequency distribution g(ω) is possible to determine the critical value εC for the onset of phase synchronization [12]
Ac
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
AUTHOR SUBMITTED MANUSCRIPT - JPCO-100523.R1
εc =
2 hki , πg(0) hk 2 i
(7)
AUTHOR SUBMITTED MANUSCRIPT - JPCO-100523.R1
pt
4
us cri
where hki and hk 2 i are the mean degree and square mean degree of the network. For finite network sizes fluctuations in the Kuramoto Order Parameter can be observed. For large networks sizes, N → ∞, the onset of phase synchronization is the moment in which the Kuramoto Order Parameter starts to increase from zero towards one. 4. Networks
To verify if the phase synchronization in the Kuramoto and Rulkov model are really equivalent we analyzed three different types of network: Erd¨os-R´enyi, Small-World and Scale-Free. 4.1. Erd¨os-R´enyi Network
dM
an
This type of network consists of a random network. It is generated from N initially uncoupled nodes. The uncoupled nodes are connected by NK random links, the links are randomly according to an uniform probability p [13]. This probability must to satisfy the relation NK p= . (8) N (N − 1) In the example of Figure 3 (a) is used a Erd¨os-R´enyi network with Nk = 5000 links. 4.2. Small-World Network
pte
Small-world networks are a type of networks where every node has few connections but the distance (in the number of sites) between any two sites in the network is small [14]. There are several methods to construct a small-world network, here we will consider the Newman-Watts procedure [15]. In this procedure, we start with a regular network of size N , every site is connected with K first neighbors. According with a p uniform probability distribution pN K new connections are added in the network. In the example of Figure 3 (b) is used a small-world network with K = 20 and p = 0.1. 4.3. Scale-Free Network
ce
To build this type of network we start with an initial Erd¨os-R´enyi network of size N0 , then we insert a new site performing two connections, one random connection and another with the most connected site in the initial network. This procedure is repeated until the network reaches the desirable size N [16]. In the example of Figure 3 (c) is used a scale-free network with N0 = 23 and N0k = 23.
Ac
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
Page 4 of 7
5. Phase synchronization The transition from asynchronous to a partial synchronized state can be analyzed through the Kuramoto Order Parameter. The temporal Kuramoto Order Parameter
Page 5 of 7
pt
5 is N
1 X iϕn e |, rn = | N i=1
us cri
(9)
and to analyze phase synchronization we use the average order parameter ′
n 1 X R= ′ rn , n n=1
(10)
where n′ is a sufficient large number of iterations.
6. Comparison Between Kuramoto and Rulkov models Considering coupled Rulkov neurons, their equations are (i)
= α /(1 +
2 (x(i) n ) )
+
N X
an
(i) xn+1
yn(i)
+ε
Aij x(j) n ,
(11)
j=1
(i)
yn+1 = yn(i) − η(x(i) n − σ),
(12)
pte
dM
in which Aij is the connection matrix, ε is the coupling strength, η and σ are the same of the uncoupled case. If α ∈ [4.1 : 4.3], each α will have a distinct bursting frequency Ω. For this reason, if the α(i) parameters are chosen from a given probability density function, then the associated distribution of bursting frequencies Ω will satisfy the same probability density function. When the natural frequencies ω of Kuramoto oscillators and the bursting oscillation frequency Ω of Rulkov neurons, obey the same probability distribution function then we can build a network of Kuramoto oscillators with the same phase synchronization transition than the network of Rulkov neurons. To show this property we will consider that the frequencies obey an uniform distribution, in this case ( 1 for −a ≤ ω ≤ a 2a , (13) g(ω) = 0 otherwise
ce
where a is the range, ω ∈ [−a : a]. For this g(ω) the critical value of the Kuramoto network will be [12] εc =
4a hki , π hk 2 i
(14)
this equation can be rewriten as
Ac
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
AUTHOR SUBMITTED MANUSCRIPT - JPCO-100523.R1
a=
πεc hk 2 i . 4 hki
(15)
In this case, the bursting frequencies Ω of the Rulkov neurons will uniformly vary from 0.0175 to 0.03, as shown in Figure 2. The equation (15) allow us to build a network of Kuramoto oscillators with the same onset for phase synchronization than a specific network of Rulkov neurons with a known εc . To generate this equivalent network we just need to determine the a value.
AUTHOR SUBMITTED MANUSCRIPT - JPCO-100523.R1
pt
6
(a)
ε
1 0,8 0,6 R 0,4 0,2 0,002 0,004 00
an
1 0,8 0,6 R 0,4 0,2 0,005 0,01 00
ε
(c)
0,02
ε
0,04
dM
1 0,8 0,6 R 0,4 0,2 0 0
(b)
us cri
Consequently, they will have the same εc and the same phase synchronization transition. Examples using the three mentioned networks are shown in the Figure 3. For this example, the Kuramoto oscillators were integrated with classical Runge-Kutta method with step h = 0.01, the average order parameter was calculated over 104 iterations per site after 16 × 104 transient iterations and 20 distinct random initial conditions were used. For the Rulkov neurons, the order parameter is an average of 104 iterations per site after 8 × 104 transient iterations and 50 distinct random initial conditions.
Figure 3. Comparison in the order parameter for the three different network types: (a) Erd¨os-R´enyi, (b) Small-World and (c) Scale-free. Black color indicates the result for coupled Rulkov neurons and blue color for Kuramoto oscillators. Dashed lines indicate the critical coupling strength εc . The network size is N = 1000.
pte
As networks of Figure 3 are finite size networks, the critical value εc , that will generate the equivalence between the models, is not the coupling value where the Kuramoto Order Parameter starts to increase above the fluctuation but an intermediate value, as indicated by dashed lines in Figure 3. The more abrupt is the phase synchronization transition or the larger is the network size the better is the equivalence between both models.
ce
7. Final Considerations
When the natural frequencies of Kuramoto oscillators and the bursting frequencies of Rulkov neurons obey the same probability distribution function, it is possible to adjust the range of frequencies in the Kuramoto network such that both models can have the same phase synchronization transition. We have shown only the results for uniform distribution, but any other unimodal, symmetric and truncated distribution can provide similar results (truncated Cauchy distribution, for example) [8]. Equivalences for other types of distribution still need to be study. The presented method works well for neurons with regular bursting. Although we have not compared with experimental results, we expect this method can be used to describe phase synchronization for in vitro neuronal networks, with bursting patterns
Ac
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
Page 6 of 7
Page 7 of 7
pt
7
us cri
similar to those described by the Rukov model. The equivalence between Rulkov neurons and Kuramoto oscillators remains the same for different types of networks. Unfortunately, cases where bursting frequency is not regular the method fails. We expect in future works to develop a more general method to include irregular bursting neurons. Acknowledgments
This work was made possible through financial support from the Brazilian Research Agencies, CAPES and CNPq. References
ce
pte
dM
an
[1] EM Izhikevich. Neural excitability, spiking and bursting. International Journal of Bifurcation and Chaos, 10:1171, 2000. [2] B Cazelles, M Courbage, and M Rabinovich. Anti-phase regularization of coupled chaotic maps modelling bursting neurons. Europhysics Letters, 55:504, 2001. [3] RC Elson, AI Selverston, R Huerta, and NF Rulkov. Synchronous behavior of two coupled biological neurons. Physical Review Letters, 81:5692, 1998. [4] WQ Yun and LQ Shao. Phase synchronization in small world chaotic neural networks. Chinese Physics Letters, 22:1329, 2005. [5] CAS Batista, AM Batista, JCA de Pontes, SR Lopes, and RL Viana. Bursting synchronization in scale-free networks. Chaos, Solitions and Fractals, 41:2220, 2009. [6] Y Kuramoto. Self-entrainment of a population of coupled non-linear oscillators. Lecture Notes on Physics, 39:420, 1975. [7] SH Strogatz. From kuramoto to crawford: exploring the onset of synchronization in populations of coupled oscillators. Physica D, 43:1, 2000. [8] FAS Ferrari, RL Viana, SR Lopes, and R Stoop. Phase synchronization of coupled bursting neurons and the generalized Kuramoto model. Neural Networks, 66:107, 2015. [9] NF Rulkov. Regularization of synchronized chaotic bursts. Physical Review Letters, 86:183, 2001. [10] MV Ivanchenko, GV Osipov, VD Shalfeev, and J Kurths. Phase synchronization in ensembles of bursting oscillators. Physical Review Letters, 93:134101, 2004. [11] JA Acebrn, LL Bonilla, CJP Vicente, and R Spigler. The kuramoto model: A simple paradigm for synchronizatino phenomena. Reviews of modern physics, 77:137, 2005. [12] JG Restrepo, E Ott, and BR Hunt. Onset of synchronization in large networks of coupled oscillators. Physical Review E, 71:036151, 2005. [13] P Erd¨ os and A R´enyi. On the evolution of random graphs. Publications of the Mathematical Institute of the Hungarian Academy of Sciences, 5:17, 1960. [14] DJ Watts and SH Strogatz. Collective dynamics of ’small-world’ networks. Nature, 393:440, 1998. [15] MEJ Newman, SH Strogatz, and DJ Watts. Random graphs with arbitrary degree distributions and their applications. Physical Review E, 64:026118, 2001. [16] AL Barabsi and R Albert. Emergence of scaling in random networks. Science, 286:507, 1999.
Ac
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
AUTHOR SUBMITTED MANUSCRIPT - JPCO-100523.R1