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Galaxy Genome annotation Updated Tripal tools Bug fixes for Apollo and its docker image RDF/SPARQL with AskOmics + link with JBrowse New tools
ArrayExpress as data source in Galaxy through BioSamples
Training material ●
ATAC seq
●
metaproteomics
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Galaxy tours
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small RNA seq
●
…
Galaxy tour builder
https://github.com/tailordev/galaxy-tourbuilder
New ChIP-Seq Galaxy flavor example Requirements: Docker toolbox for MacOS + Galaxy stable image: (bgruening/galaxy-stable) Get a galaxy-stable image with Kitematic
my_tool_list.yml
Galaxy ChIP-Seq data analysis tools installation Generate tools list Workflow creation Publish
Install the tools required for ChIP-Seq analysis
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Dockerfile
Documentation
Create a workflow (easy way is using history)
Publish the image using a Dockerfile. Put dockerfile, workflow and tools list (.yaml) on GitHub.
+
and much more ●
API to uninstall repo
●
Python 2.x to 3.x
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Webhooks
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Tagging of Data Libraries
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Tool internationalization
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Ansible for reference data
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OpenBis integration
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Trackster
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Paste server replaced
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CWL/bio.toools/Galaxy descriptors
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Bug fixes...
2017 Feedback More User and Dev hack interactions ●
What we had this year was an improvement! Let’s keep it up!
Great opportunity to learn and get help Idea: small group leaders
