Saccharomycopsis fibuligera glucoamylase in Escherichia coli, refolding, and. Mycol. Res. 101 (4): 502â509 (1997) Printed in Great Britain. One stop mycology ...
Mycol. Res. 101 (4): 502–509 (1997)
502
Printed in Great Britain
One stop mycology
LILYANN NOVAK FRAZER MycoTech Ltd, The Campus Ventures Centre, Electrical Engineering Building, The University of Manchester, Manchester M13 9PL, U.K.
This listing covers the period March 1, 1996 through to April 30, 1996. Citations are arranged in groups which roughly correspond with the British Mycological Society’s Special Interest Committees. All correspondence about this item should be addressed to the Executive Editor. Reprints of this feature will not be available. BIOTECHNOLOGY Aho, S., Arffman, A. & Korhola, M. (1996). Saccharomyces cerevisiae mutants selected for increased production of Trichoderma reesei cellulases. Applied Microbiology & Biotechnology 46, 36–45. Gachhui, R., Presta, A., Bentley, D. F., Abusoud, H. M., McArthur, R., Brudvig, G., Ghosh, D. K. & Stuehr, D. J. (1996). Characterization of the reductase domain of rat neuronal nitric oxide synthase generated in the methylotrophic yeast Pichia pastoris – calmodulin response is complete within the reductase domain itself. Journal of Biological Chemistry 271, 20594–20602. Gardiner, J. M., Coe, E. H. & Chao, S. (1996). Cloning maize telomeres by complementation in Saccharomyces cerevisiae. Genome 39, 736–748. Gellissen, G., Piontek, M., Dahlems, U., Jenzelewski, V., Gavagan, J. E., DiCosimo, R., Anton, D. L. & Janowicz, Z. A. (1996). Recombinant Hansenula polymorpha as a biocatalyst – coexpression of the spinach glycolate oxidase (GO) and the S. cerevisiae catalase T (CTT1) gene. Applied Microbiology & Biotechnology 46, 46–54. Gouka, R. J., Hessing, J. G. M., Punt, P. J., Stam, H., Musters, W. & van den Hondel, C. A. M. J. J. (1996). An expression system based on the promoter region of the Aspergillus awamori 1,4-β-endoxylanase A gene. Applied Microbiology & Biotechnology 46, 28–35. Huang, J., Cao, C. & Lutkenhaus, J. (1996). Interaction between FtsZ and inhibitors of cell division. Journal of Bacteriology 178, 5080–5085. Johnson, B. L., Thyagarajan, B., Krueger, L., Hirsch, B. & Campbell, C. (1996). Elevated levels of recombinational DNA repair in human somatic cells expressing the Saccharomyces cerevisiae RAD52 gene. Mutation Research – DNA Repair 363, 179–189. Klein, S., Zenvirth, D., Sherman, A., Ried, K., Rappold, G. & Simchen, G. (1996). Double-strand breaks on YACs during yeast meiosis may reflect meiotic recombination in the human genome. Nature Genetics 13, 481–484. Knibiehler, M., Goubin, F., Escalas, N., Jonsson, Z. O., Mazarguil, H., Hubscher, U. & Ducommun, B. (1996). Interaction studies between the p21Cip1}Waf1 cyclin-dependent kinase inhibitor and proliferating cell nuclear antigen (PCNA) by surface plasmon resonance. FEBS Letters 391, 66–70. Lee, F. W. F. & DaSilva, N. A. (1996). Ty1-mediated integration of expression cassettes – host strain effects, stability, and product synthesis. Biotechnology Progress 12, 548–554.
Mason, A. B., Woodworth, R. C., Oliver, R. W. A., Green, B. N., Lin, L. N., Brandts, J. F., Tam, B. M., Maxwell, A. & Macgillivray, R. T. A. (1996). Production and isolation of the recombinant N-lobe of human serum transferrin from the methylotrophic yeast Pichia pastoris. Protein Expression & Purification 8, 119–125. Michaud, A., Houard, X., Chauvet, M. T., Soubrier, F. & Corvol, P. (1996). Drosophila melanogaster angiotensin I-converting enzyme expressed in Pichia pastoris resembles the C domain of the mammalian homologue and does not require glycosylation for secretion and enzymic activity. Biochemical Journal 318, 125–131. Moreira, M. T., SanRoman, A., Feijoo, G. & Lema, J. M. (1996). Control of pellet morphology of filamentous fungi in fluidized bed bioreactors by means of a pulsing flow – application to Aspergillus niger and Phanerochaete chrysosporium. Enzyme & Microbial Technology 19, 261–266. Neumann, E., Kakorin, S., Tsoneva, I., Nikolova, B. & Tomov, T. (1996). Calcium-mediated DNA adsorption to yeast cells and kinetics of cell transformation by electroporation. Biophysical Journal 71, 868–877. Popping, B., Gibbons, T. & Watson, M. D. (1996). The Pisum sativum MAP kinase homologue (PsMAPK) rescues the Saccharomyces cerevisiae hog1 deletion mutant under conditions of high osmotic stress. Plant Molecular Biology 31, 355–363. Puig, S., Querol, A., Ramon, D. & Perez-Ortin, J. E. (1996). Evaluation of the use of phase-specific gene promoters for the expression of enological enzymes in an industrial wine yeast strain. Biotechnology Letters 18, 887–892. Sadhukhan, R., Sen, G. C. & Sen, I. (1996). Synthesis and cleavage-secretion of enzymatically active rabbit angiotensin-converting enzyme in Pichia pastoris. Journal of Biological Chemistry 271, 18310–18313. Sakai, Y., Akiyama, M., Kondoh, H., Shibano, Y. & Kato, N. (1996). High-level secretion of fungal glucoamylase using the Candida boidinii gene expression system. Biochimica et Biophysica Acta – Gene Structure & Expression 1308, 81–87. Scotti, P. A., Praestegaard, M., Chambert, R. & Petitglatron, M. F. (1996). The targeting of Bacillus subtilis levansucrase in yeast is correlated to both the hydrophobicity of the signal peptide and the net charge of the N-terminus mature part. Yeast 12, 953–963. Sengupta, D. J., Zhang, B. L., Kraemer, B., Pochart, P., Fields, S. & Wickens, M. (1996). A three-hybrid system to detect RNA-protein interactions in vivo. Proceedings of the National Academy of Sciences of the U.S.A. 93, 8496–8501. Shimada, Y., Sugihara, A. & Tominaga, Y. (1996). Expression of lipase cDNA from Fusarium heterosporum by Saccharomyces cerevisiae – high-level production and purification. Journal of Fermentation & Bioengineering 81, 488–492. Smith, P. M., Suphioglu, C., Griffith, I. J., Theriault, K., Knox, R. B. & Singh, M. B. (1996). Cloning and expression in yeast Pichia pastoris of a biologically active form of Cyn d 1, the major allergen of Bermuda grass pollen. Journal of Allergy & Clinical Immunology 98, 331–343. Solovicova, A., Gasperik, J. & Hostinova, E. (1996). High-yield production of Saccharomycopsis fibuligera glucoamylase in Escherichia coli, refolding, and
Lilyann Novak Frazer comparison of the nonglycosylated and glycosylated enzyme forms. Biochemical & Biophysical Research Communications 224, 790–795. Watson, M. A., Buckholz, R. & Weiner, M. P. (1996). Vectors encoding alternative antibiotic resistance for use in the yeast two-hybrid system. Biotechniques 21, 255–259. Witter, D. J. & Poulter, C. D. (1996). Yeast geranylgeranyltransferase type-II – steady state kinetic studies of the recombinant enzyme. Biochemistry 35, 10454–10463. Yang, S. T. & Shu, C. H. (1996). Kinetics and stability of GM-CSF production by recombinant yeast cells immobilized in a fibrous-bed bioreactor. Biotechnology Progress 12, 449–456. Yang, Z., Suzuki, H., Sasaki, S. & Karube, I. (1996). Disposable sensor for biochemical oxygen demand. Applied Microbiology & Biotechnology 46, 10–14. Yun, D. J., Durzo, M. P., Abad, L., Takeda, S., Salzman, R., Chen, Z. T., Lee, H., Hasegawa, P. M. & Bressan, R. A. (1996). Novel osmotically induced antifungal chitinases and bacterial expression of an active recombinant isoform. Plant Physiology 111, 1219–1225.
ECOLOGY Parbery, D. G. (1996). Trophism and the ecology of fungi associated with plants. Biological Reviews of the Cambridge Philosophical Society 71, 473–527.
SYSTEMATICS & STRUCTURE, FORAY & CONSERVATION Anafi, M., Rosen, M. K., Gish, G. D., Kay, L. E. & Pawson, T. (1996). A potential SH3 domain-binding site in the Crk SH2 domain. Journal of Biological Chemistry 271, 21365–21374. Baba, N., Ichise, N. & Tanaka, T. (1996). Image area extraction of biological objects from a thin section image by statistical texture analysis. Journal of Electron Microscopy 45, 298–306. Bai, F. Y. (1996). Separation of Candida fermentati comb. nov. from Candida guilliermondii by DNA base composition and electrophoretic karyotyping. Systematic & Applied Microbiology 19, 178–181. Binder, M., Hartig, A. & Sata, T. (1996). Immunogold labeling of yeast cells – an efficient tool for the study of protein targeting and morphological alterations due to overexpression and inactivation of genes. Histochemistry & Cell Biology 106, 115–130. Boteva, R. & Salvato, B. (1996). Catalytic mechanism of mitochondrial processing peptidase – fluorescence studies. Archives of Biochemistry & Biophysics 332, 323–328. Bukusoglu, G. & Jenness, D. D. (1996). Agonist-specific conformational changes in the yeast α-factor pheromone receptor. Molecular & Cellular Biology 16, 4818–4823. Burke, J., Lipari, F., Igdoura, S. & Herscovics, A. (1996). The Saccharomyces cerevisiae processing α-1,2-mannosidase is localized in the endoplasmic reticulum, independently of known retrieval motifs. European Journal of Cell Biology 70, 298–305. Cantelli, C., Bernigaud, A., Jouault, T. & Poulain, D. (1996). Evidence for different mannosylation processes involved in the association of β-1,2linked oligomannosidic epitopes in Candida albicans mannan and phospholipomannan. Microbiology (UK) 142, 2263–2270. Chanet, R., Heude, M., Adjiri, A., Maloisel, L. & Fabre, F. (1996). Semidominant mutations in the yeast Rad51 protein and their relationships with the Srs2 helicase. Molecular & Cellular Biology 16, 4782–4789. Churukian, C. J. (1996). Consistent silver methods for demonstrating basement membranes, reticulum, and fungi. Journal of Histotechnology 19, 211–217. Davidson, F. A., Sleeman, B. D., Rayner, A. D. M., Crawford, J. W. & Ritz, K. (1996). Context-dependent macroscopic patterns in growing and interacting mycelial networks. Proceedings of the Royal Society of London – Series B : Biological Sciences 263, 873–880. Dengis, P. B. & Rouxhet, P. G. (1996). Preparation of yeast cells for surface analysis by XPS. Journal of Microbiological Methods 26, 171–183. Ertola, R. J. J. & Voget, C. E. (1996). Characterization of a glutaraldehyde stabilized yeast cell biocatalyst with β-galactosidase activity. Journal of Fermentation & Bioengineering 81, 524–529.
503 Fung, K. L., Hilgenberg, L., Wang, N. M. & Chirico, W. J. (1996). Conformations of the nucleotide and polypeptide binding domains of a cytosolic Hsp70 molecular chaperone are coupled. Journal of Biological Chemistry 271, 21559–21565. Garvey, W. (1996). Some favorite silver stains. Journal of Histotechnology 19, 269–278. Grizzle, W. E. (1996). Theory and practice of silver staining in histopathology. Journal of Histotechnology 19, 183–195. Houen, G., Nielsen, O. & Flanagan, C. (1996). Structural requirements for αmating factor activity. FEBS Letters 391, 162–166. Izumida, H., Nishijima, M., Takadera, T., Nomoto, A. M. & Sano, H. (1996). The effect of chitinase inhibitors, cyclo(Arg-Pro) against cell separation of Saccharomyces cerevisiae and the morphological change of Candida albicans. Journal of Antibiotics 49, 829–831. Lei, M., Kawasaki, Y. & Tye, B. K. (1996). Physical interactions among Mcm proteins and effects of Mcm dosage on DNA replication in Saccharomyces cerevisiae. Molecular & Cellular Biology 16, 5081–5090. Manfredi, J. P., Klein, C., Herrero, J. J., Byrd, D. R., Trueheart, J., Wiesler, W. T., Fowlkes, D. M. & Broach, J. R. (1996). Yeast α mating factor structureactivity relationship derived from genetically selected peptide agonists and antagonists of Ste2p. Molecular & Cellular Biology 16, 4700–4709. O’Shea, D. G. & Walsh, P. K. (1996). Morphological characterization of the dimorphic yeast Kluyveromyces marxianus var. marxianus NRRLy2415 by semi-automated image analysis. Biotechnology & Bioengineering 51, 679–690. Parra, K. J. & Kane, P. M. (1996). Wild-type and mutant vacuolar membranes support pH-dependent reassembly of the yeast vacuolar H+-ATPase in vitro. Journal of Biological Chemistry 271, 19592–19598. Pei, Z. D. & Sebti, S. M. (1996). Cys"!# and His$*) are required for bleomycininactivating activity but not for hexamer formation of yeast bleomycin hydrolase. Biochemistry 35, 10751–10756. Phelps, A., Briggs, C., Mincone, L. & Wohlrab, H. (1996). Mitochondrial phosphate transport protein – replacements of glutamic, aspartic, and histidine residues affect transport and protein conformation and point to a coupled proton transport path. Biochemistry 35, 10757–10762. Pollegioni, L. & Pilone, M. S. (1996). On the holoenzyme reconstitution process in native and truncated Rhodotorula gracilis D-amino acid oxidase. Archives of Biochemistry & Biophysics 332, 58–62. Prodromou, C., Piper, P. W. & Pearl, L. H. (1996). Expression and crystallization of the yeast Hsp82 chaperone, and preliminary X-ray diffraction studies of the amino-terminal domain. Proteins 25, 517–522. Rafferty, S. P., Guillemette, J. G., Berghuis, A. M., Smith, M., Brayer, G. D. & Mauk, A. G. (1996). Mechanistic and structural contributions of critical surface and internal residues to cytochrome c electron transfer reactivity. Biochemistry 35, 10784–10792. Romano, A., Casaregola, S., Torre, P. & Gaillardin, C. (1996). Use of RAPD and mitochondrial DNA RFLP for typing of Candida zeylanoides and Debaryomyces hansenii yeast strains isolated from cheese. Systematic & Applied Microbiology 19, 255–264. Sadowski, I., Costa, C. & Dhanawansa, R. (1996). Phosphorylation of Gal4p at a single C-terminal residue is necessary for galactose-inducible transcription. Molecular & Cellular Biology 16, 4879–4887. Scheffzek, K., Kliche, W., Wiesmuller, L. & Reinstein, J. (1996). Crystal structure of the complex of UMP}CMP kinase from Dictyostelium discoideum and the bisubstrate inhibitor P-1-(5«-adenosyl) P-5-(5«-uridyl) pentaphosphate (UP A) and Mg#+ at 2.2 angstrom – implications for water& mediated specificity. Biochemistry 35, 9716–9727. Sibirnyi, A. A., Kulachkovskii, A. R. & Moroz, O. M. (1996). Formation of hybrid microbodies (glyoxyperoxisomes) containing alcohol oxidase and malate synthase in a regulatory mutant of the methylotrophic yeast Pichia methanolica. Microbiology 65, 400–403. Song, J. P., Hirschman, J., Gunn, G. & Dohlman, H. G. (1996). Regulation of membrane and subunit interactions by N-myristoylation of a G protein α subunit in yeast. Journal of Biological Chemistry 271, 20273–20283. Srikantha, T., Wessels, D., Decock, M., Lockhart, S. R. & Soll, D. R. (1996). Cytoplasmic localization of the white phase-specific WH11 gene product of Candida albicans. Microbiology (UK) 142, 2245–2254. Storlazzi, A., Xu, L. Z., Schwacha, A. & Kleckner, N. (1996). Synaptonemal complex (SC) component zip1 plays a role in meiotic recombination independent of SC polymerization along the chromosomes. Proceedings of the National Academy of Sciences of the U.S.A. 93, 9043–9048.
One stop mycology Tang, H. Y. & Cai, M. J. (1996). The EH-domain-containing protein Pan1 is required for normal organization of the actin cytoskeleton in Saccharomyces cerevisiae. Molecular & Cellular Biology 16, 4897–4914. Vicente, A., Meinders, J. M. & Teixeira, J. A. (1996). Sizing and counting of Saccharomyces cerevisiae floc populations by image analysis, using an automatically calculated threshold. Biotechnology & Bioengineering 51, 673–678. Wingfield, M. J., Debeer, C., Visser, C. & Wingfield, B. D. (1996). A new Ceratocystis species defined using morphological and ribosomal DNA sequence comparisons. Systematic & Applied Microbiology 19, 191–202. Zeng, S., Wu, L. C. & Lehmann, P. F. (1996). Random amplified polymorphic DNA analysis of culture collection strains of Candida species. Journal of Medical & Veterinary Mycology 34, 293–297. Zhang, T. & Zhou, H. M. (1996). Comparison of inactivation and unfolding of yeast alcohol dehydrogenase during denaturation in urea solutions. International Journal of Biological Macromolecules 19, 113–119. Zueco, J., Perez, J., Penarroja, C. & Sentandreu, R. (1996). A comparative study of the incorporation of a 1,6-β-glucan and an O-glycosylated protein epitope into the cell wall of Candida albicans. Microbiology (UK) 142, 2255–2262.
GENETICS, MOLECULAR BIOLOGY & EVOLUTION Aboussekhra, A., Vialard, J. E., Morrison, D. E., De La Torre-Ruiz, M. A., Cernakova, L., Fabre, F. & Lowndes, N. F. (1996). A novel role for the budding yeast RAD9 checkpoint gene in DNA damage-dependent transcription. EMBO Journal 15, 3912–3922. Adams, A. K. & Holm, C. (1996). Specific DNA replication mutations affect telomere length in Saccharomyces cerevisiae. Molecular & Cellular Biology 16, 4614–4620. Alizadeh, P. & Klionsky, D. J. (1996). Purification and biochemical characterization of the ATH1 gene product, vacuolar acid trehalase, from Saccharomyces cerevisiae. FEBS Letters 391, 273–278. Amiri, K. M. A. & Hagerman, P. J. (1996). The global conformation of an active hammerhead RNA during the process of self-cleavage. Journal of Molecular Biology 261, 125–134. Arselin, G., Vaillier, J., Graves, P. V. & Velours, J. (1996). ATP synthase of yeast mitochondria – isolation of the subunit H and disruption of the ATP14 gene. Journal of Biological Chemistry 271, 20284–20290. Bagavathi, S. & Malathi, R. (1996). Introns and protein revolution – an analysis of the exon}intron organisation of actin genes. FEBS Letters 392, 63–65. Bakkeren, G. & Kronstad, J. W. (1996). The pheromone cell signaling components of the Ustilago a mating-type loci determine intercompatibility between species. Genetics 143, 1601–1613. Bauer, A. & Kolling, R. (1996). Characterization of the SAC3 gene of Saccharomyces cerevisiae. Yeast 12, 965–975. Beelman, C. A., Stevens, A., Caponigro, G., LaGrandeur, T. E., Hatfield, L., Fortner, D. M. & Parker, R. (1996). An essential component of the decapping enzyme required for normal rates of mRNA turnover. Nature 382, 642–646. Bernues, J., Carrera, P. & Azorin, F. (1996). TBP binds the transcriptionally inactive TA sequence but the resulting complex is not efficiently & recognised by TFIIB and TFIIA. Nucleic Acids Research 24, 2950–2958. Bonjardim, C. A., Pereira, L. S. & Nobrega, F. G. (1996). Analysis of exon and intron mutants in the cytochrome b mitochondrial gene of Saccharomyces cerevisiae. Current Genetics 30, 200–205. Brennan, R. J., Kandikonda, S., Khrimian, A. P., Demilo, A. B., Liquido, N. J. & Schiestl, R. H. (1996). Saturated and monofluoro analogs of the oriental fruit fly attractant methyl eugenol show reduced genotoxic activities in yeast. Mutation Research : Genetic Toxicology 369, 175–181. Brys, A. & Schwer, B. (1996). Requirement for SLU7 in yeast pre-mRNA splicing is dictated by the distance between the branchpoint and the 3« splice site. RNA – A Publication of the RNA Society 2, 707–717. Camasses, A. (1996). Natural translocation of a large segment of chromosome III to chromosome I in a laboratory strain of Saccharomyces cerevisiae. Current Genetics 30, 218–223.
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