Order Species Promoters Identified > 70% match

Order Afrosoricida

Species

Chrysochloris asiatica Echinops telfairi Artiodactyla (Cetacea) Orcinus orca Physeter macrocephalus Tursiops truncatus Balaenoptera acutorostrata Lipotes vexillifer Balaenoptera bonaerensis Artiodactyla (Artiofabula) Sus scrofa Artiodactyla (Ruminantiamorpha) Okapia johnstoni Giraffa camelopardalis Capreolus capreolus Odocoileus virginianus Bos indicus Bos mutus Bison bison Pantholops hodgsonii Capra hircus Capra aegagrus Ovis aries Bubalus bubalis Artiodactyla (Tylopoda) Camelus bactrianus Camelus dromedarius Camelus ferus Vicugna pacos Carnivora Panthera pardus Felis catus Canis familiaris Ursus maritimus Panthera tigris Leptonychotes weddellii

Promoters Promoters Promoters Promoters Identified Identified Identified Identified > 70% >= 90% >= 95% >= 99% match match match match 1346 536

126 44

17 5

0 0

3774 3009 2918 2780 3249 2603

411 267 269 235 302 215

49 31 30 33 35 26

1 1 1 1 1 1

2414

264

36

1

2445 2481 1602 3 1975 1628 1617 1479 2623 1256 1929 2093

255 269 148 0 197 160 164 138 307 115 179 205

34 32 16 0 23 23 24 18 41 16 22 24

1 1 1 0 1 1 1 1 1 1 1 1

2249 2022 1831 2600

204 197 181 259

24 30 23 28

1 1 1 1

2870 2455 1950 1819 1692 3169

335 282 250 207 198 345

41 34 35 33 23 39

1 1 0 1 1 1

Ailurus fulgens Mustela putorius Ailuropoda melanoleuca Lycaon pictus Acinonyx jubatus

2434 2363 2255 1665 1503

262 279 252 204 175

32 37 31 27 22

1 1 1 0 1

Hipposideros armiger Rousettus egyptiacus Pteropus vampyrus Rhinolophus sinicus Pteropus alecto Rhinolophus ferrumequinum Eptesicus fuscus Eidolon helvum Myotis lucifugus Miniopterus natalensis Myotis brandti Myotis mystacinus Pteronotus parnellii Megaderma lyra

3034 2968 2868 2866 2493 2003 1860 1836 1691 1531 1296 1148 1050 841

250 294 282 240 213 151 148 145 134 114 117 95 94 69

25 38 37 23 26 18 20 19 14 13 12 8 12 11

1 1 1 1 1 1 1 1 1 0 1 1 1 0

1730

162

18

0

51

7

2

0

4159

410

47

1

63

11

2

0

35

6

1

0

437 1359 581

59 160 64

7 21 7

1 1 0

1306

101

14

1

1641

163

24

1

Chiroptera

Cingulata Dasypus novemcinctus Dasyuromorphia Sarcophilus harrisii Dermoptera Galeopterus variegatus Didelphimorphia Monodelphis domestica Diprotodontia Macropus eugenii Eulypotyphla Sorex araneus Condylura cristata Erinaceus europaeus Hyracoidea Procavia capensis Lagomorpha Oryctolagus cuniculus

Macroscelidea Elephantulus edwardii

810

89

15

1

19

3

1

1

Ceratotherium simum Equus asinus Equus caballus Equus przewalskii

4488 3317 3228 2774

479 306 313 251

58 43 43 36

2 1 1 1

Manis javalinca Manis pentadactyla

2057 1495

157 122

19 17

1 1

Choloepus hoffmanni

2195

193

19

0

25496 24686 22165 22072 21945 21918 21554 21190 21187 20124 20084 20017 19222 19213 17455 16946 16751 15514 15224 13093 13024 11373 6879 6434 6205 5980

25495 24629 19055 19078 18839 18695 18741 20953 21115 16899 20009 17564 16567 18805 7060 14626 14758 6921 5495 11343 4949 1880 950 864 793 722

25495 23997 5376 5207 5196 5408 5238 16342 20380 4112 19593 4959 4139 12748 828 3727 4107 750 549 2910 552 472 134 117 103 90

25472 9441 61 52 51 49 49 320 4257 23 7627 44 34 176 10 27 39 7 7 24 4 152 4 1 1 1

Monotremata Ornithorhynchus anatinus Perissodactyla

Pholidota

Pilosa Primates Homo sapiens Pan troglodytes Cercocebus atys Chlorocebus sabaeus Macaca nemestrina Macaca mulatta Papio anubis Pongo abelii Gorilla gorilla Rhinopithecus bieti Pan paniscus Macaca fascicularis Rhinopithecus roxellana Nomascus leucogenys Cebus capucinus Colobus angolensis Mandrillus leucophaeus Aotus nancymaae Callithrix jacchus Nasalis larvatus Saimiri boliviensis Odobenus rosmarus Propithecus coquereli Microcebus murinus Eulemur flavifrons Eulemur macaco

Otolemur garnettii Daubentonia madagascariens Carlito syrichta

4058 2375 3549

470 338 432

67 51 47

1 1 1

Loxodonta africana

2067

176

18

1

Mus caroli Mus pahari Rattus norvegicus Mus spretus Apodemus sylvaticus Castor canadensis Cavia porcellus Cavia aperea Chinchilla lanigera Cricetulus griseus Dipodomys ordii Ellobius talpinus Ellobius lutescens Heterocephalus glaber Ictidomys tridecemlineatus Jaculus jaculus Marmota marmota Mesocricetus auratus Microtus ochrogaster Microtus agrestis Myodes glareolus Nannospalax galili Neotoma lepida Peromyscus maniculatus Phodopus sungorus Octodon degus Cryptomys damarensis Ochotona princeps

751 718 698 695 374 2426 1107 187 1352 408 735 534 301 1691 2469 640 2198 692 733 430 484 954 635 742 347 1039 924 796

86 83 74 76 36 292 128 33 156 46 74 56 33 162 297 56 226 77 81 45 46 92 69 81 37 116 92 88

11 11 10 10 3 32 16 5 25 5 15 6 4 23 41 7 35 9 7 4 3 10 7 9 3 16 15 11

0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1

Tupaia chinensis Tupaia belangeri

1731 1390

200 162

24 17

1 1

Trichechus manatus

2574

203

23

1

Orycteropus afer

1811

170

20

1

Proboscidea Rodentia

Scandentia

Sirenia Tubulidentata