Prevalence and Antimicrobial Susceptibility Pattern of ...

British Journal of Medicine & Medical Research 3(1): 198-209, 2013

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Prevalence and Antimicrobial Susceptibility Pattern of Methicillin-Resistant Staphylococcus aureus and Coagulase-Negative Staphylococci in Rawalpindi, Pakistan Irum Perveen1*, Abdul Majid2, Sobia Knawal3, Iffat Naz1, Shama Sehar1, Safia Ahmed1 and Muhammad Asam Raza4 1

Department of Microbiology, Quaid-i-Azam University, Islamabad, 45320, Pakistan. 2 Department of Internal Medicine, Military Hospital, Rawalpindi, Pakistan. 3 Department of Animal Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan. 4 Department of Chemistry, Hafiz hayat Campus, University of Gujrat, Gujrat, Pakistan. Authors’ contributions This work was carried out in collaboration between all authors. Author IP designed the study, carried the experiments. Authors AM and SK searched out the literature. Authors SA and IN did the analysis and wrote the first draft of the manuscript. Authors SS and MAR contributed to the study design, the analysis of the results and writing the manuscript. All authors read and approved the final manuscript.

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Research Article

Received 22 August 2012 th Accepted 17 November 2012 th Published 9 January 2013

ABSTRACT Methicillin resistant Staphylococcus aureus (MRSA) and methicillin resistant coagulase negative staphylococci (MRCoNS) are the important nosocomial infectious agents. There is a growing concern about the rapid rise in the resistance of Staphylococcus aureus to presently available antimicrobial agents. The aim of this study was to evaluate the prevalence rate of MRSA and MRCoNS and their rate of resistance to different antistaphylococcal antibiotics used broadly for treatment. Out of the total 350 staphylococcal isolates from different clinical specimens 148 isolates (60.40%) were identified as MRSA by oxacillin screen agar method, and 46 isolates (43.80%) were screened as MRCoNS. All the MRSA and MRCoNS isolates were tested for antibiotic resistance pattern by disc diffusion method for 16 different antibiotics. All the isolates of ___________________________________________________________________________________________ *Corresponding author: Email: [email protected];

British Journal of Medicine & Medical Research, 3(1): 198-209, 2013

MRSA and MRCoNS were multi-drug resistant. Antibiotic resistance pattern of these isolates was high against penicillin. All the MRSA strains were resistant to penicillin and oxacillin (100%), followed by cephalothin and nalidixic acid (89.18%), cotrimoxazole (86.48%), erythromycin (85.81%), cephalaxin and cephradine (83.10%), levofloxacin (80.40%), imipenem (77.70%), gentamicin (76.35%), tetracycline (59.45%), ciprofloxacin (44.59%), chloramphenicol (18.24%) and rifampicin (10.13%). The MRCoNS strains also showed closely similar drug resistance pattern with 97.82% isolates being resistant to penicillin, followed by oxacillin (95.65%), cephalothin (86.95%), cephradine (82.60%), levofloxacin and nalidixic acid (80.43%), erythromycin, cephalaxin and imipenem (78.26%), cotrimoxazole (73.91%), gentamicin (69.56%), ciprofloxacin and tetracycline (63.04%), chloramphenicol (13.04%) and rifampicin (6.52%). However, all the MRSA and MRCoNS isolates, even those with very high oxacillin MIC (>130 µg/ml) were uniformly susceptible to vancomycin. Chloramphenicol and rifampicin also showed excellent activity against methicillin-resistant isolates. Overall, data presented in this study indicated a slightly higher methicillin resistant rate in MRSA compared to MRCoNS strains. Multi-drug resistance rates in our MRSA and MRCoNS isolates were, 58.10 and 32.60%, respectively. Application of ß-lactamase production method revealed that 84% of MRSA and 87% of MRCoNS strains tested positive for the ß-lactamase production. This study indicated a high level prevalence of MRSA and MRCoNS strains resistance against widely used antimicrobial agents. An appropriate knowledge on the current antibiotic susceptibility pattern of MRSA and MRCoNS is essential for appropriate therapeutic regime determination. Keywords: MRSA; MRCoNS; multidrug resistance; prevalence; antibiotic susceptibility; MIC.

1. INTRODUCTION Methicillin resistant Staphylococcus aureus (MRSA) and methicillin resistant coagulase negative staphylococci (MRCoNS) are prevalent worldwide [1,2]. These are considered as the most important cause of hospital-acquired infections (HAI) and community-acquired infections (CAI), resulting in increased morbidity and mortality in the hospital settings [3]. Methicillin was first introduced in human medicine in 1960s for the treatment of infections caused by penicillin’s resistant S. aureus [4] however first methicillin resistant S. aureus emerged in 1961 in England [5]. The widespread use of antimicrobial agents to treat staphylococcal infections has resulted in the emergence of resistant forms of these organisms. To date most MRSA have become resistant to number of antimicrobial agents like ß-lactams [6]. Emergence of MRSA worldwide has led to the overuse of glycopeptides antibiotics and to the emergence of vancomycin-resistant S. aureus [7]. Presently MRSA isolates have been uniformly susceptible only to glycopeptides. But recently, number of isolates resistant to glycopeptides has been reported [8,9]. MRSA strains are frequently resistant to many different classes of antibiotics [10]. Clinical isolates of MRSA with reduced susceptibility to glycopeptide were first described in Japan in 1997 [11]. To date, three types of reduced susceptibility to glycopeptides have been described in S. aureus: vancomycin-resistant S. aureus (VRSA), glycopeptide-intermediate S. aureus (GISA), and hetero-GISA (hGISA) [12]. Multidrug-resistant bacteria, such as MRSA, are endemic in healthcare settings in the United States and many other countries of the world. Nosocomial transmission of MRSA serves as a source of hospital outbreaks, and

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recent reports of vancomycin resistant S. aureus strains in the United States emphasize the need for better control of MRSA and other resistant bacteria within healthcare settings [13]. Power of morbidity and simultaneously resistance to other antibiotics in MRSA strains is higher than methicillin sensitive S. aureus (MSSA). Regarding to increased prevalence of these strains in recent years and pathogenesis of S. aureus, accurate and early identification of these strains is very important [14,15]. MRSA strains can grow in the presence of 16µg/ml or more of methicillin while sensitive strains are inhibited [16]. At present, MRSA has become an endemic pathogen worldwide (Kluytmans et al.,1997) and multi drug resistant [17]. Therefore, the knowledge about the prevalence of MRSA, MRCoNS and their antibiotic susceptibility pattern has become fundamental in the selection of appropriate treatment especially in a hospital setting. Although MRSA infections were traditionally limited to hospitals, community-associated cases of MRSA (CA-MRSA) were reported starting in the late 1990s [18]. The epidemiological success of CA-MRSA strains is believed to stem from the combination of antibiotic resistance at low fitness cost [19,20] with extraordinary virulence, allowing these strains to infect otherwise healthy individuals and spread sustainably in the population [21]. CA-MRSA infections, which were first described in small series of adult and pediatric patients presenting with skin and soft tissue infections (SSTIs), pneumonia, or bacteremia [22,23] have become a significant public health threat in the United States and abroad [24]. In the United States, a single clone of CA-MRSA (USA 300 ST-8) has become the most prevalent cause of staphylococcal SSTI acquired in the community [25] and has moved into the inpatient setting, causing not only SSTIs but also invasive diseases [18,20,26] . Considering the increasing rate of infections caused by MRSA, performance of reliable, accurate and rapid testing for detection of MRSA is essential for both antibiotic therapy and infection control measures [27]. In the present study we determined the prevalence level of MRSA and MRCoNS strains in different clinical specimens and there in vitro susceptibility pattern towards various antibiotics to record the current status of MRSA and MRCoNS response against commonly used anti-staphylococcus antibiotics.

2. MATERIALS AND METHODS 2.1 Isolation and Identification of Clinical Specimens A total of 350 Staphylococcus isolates were obtained from various sites of infection including blood, wound swabs, nasal and ear swabs, pus and urine collected from five major Government hospitals in Rawalpindi during April, 2011 to June 2012. The isolates collected from various clinical specimens submitted at the microbiology laboratory were processed and all Staphylococcus isolates were included in this study. S. aureus identification was performed based on standard tests such as Gram’s staining, catalase, DNase, growth on manitol salt agar, slide and tube coagulase [28]. Strains positive for these tests were labeled as S. aureus.

2.2 Antibiotic Susceptibility Testing The antibiotic susceptibility pattern of all the confirmed S. aureus strains was determined by Kirby Bauer disc diffusion method (1966) [29] against the following antibiotics: penicillin (60 µg), oxacillin (1 µg), gentamicin (10 µg), erythromycin (15 µg), cotrimoxazole (25 µg),

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ciprofloxacin (5 µg), vancomycin (30 µg), cephalaxin (30 µg), cephalothin (30 µg), cephradine (30 µg), imipenem (10 µg), levofloxacin (5 µg), tetracycline (30 µg), rifampicin (5 µg), nalidixic acid (30 µg) and chloramphenicol (30 µg), purchased from Oxoid-UK. All tests were performed on Muller- Hinton agar (Oxoid-UK), and were interpreted after incubation for 24 h at 37ºC. The zone diameters measured around each disk were interpreted on the basis of guidelines published by the Clinical and Laboratory Standards Institute [12].

2.3 Screening Test for MRSA Screening was performed following NCCLS guidelines using oxacillin agar. Briefly, a suspension equivalent to MacFarland 0.5 was prepared from each strain. Then a swab was dipped and streaked on the surface of Muller-Hinton agar (Oxoid-UK) supplemented with 6 µg/ml oxacillin and 4% NaCl, growth was observed after incubation for 24 h at 35ºC [12], if any growth was detected, the isolate was considered oxacillin or methicillin resistant.

2.4 MRSA Screening for Decreased Vancomycin Susceptibility Further, vancomycin resistance was tested by vancomycin agar screening test whereby MRSA isolates were spot inoculated into the Muller-Hinton agar (Oxoid-UK) supplemented with 6 µg/ml of vancomycin from 0.5 McFarland standard suspensions. The plates were incubated at 35ºC for 24 h as recommended by the CLSI (2006) [12]. Any isolate growing two or more colonies on this agar would be considered as positive.

2.5 Determination of Minimum Inhibitory Concentration (MIC) Micro dilution broth method, using Muller Hinton broth (Oxoid-UK) was used to determine the lowest concentration of antimicrobial agents (MICs) required inhibiting the growth of microorganism against methicillin, vancomycin, tetracycline, rifampicin and gentamicin. 5 Bacterium inoculations of 5 × 10 cfu and incubation at 35ºC for 24 h was done according to Clinical and Laboratory Standards (CLSI) guidelines [15,16].

2.6 Detection of ß-lactamase Production ß-lactamase production was determined by iodometric strip method, benzyl penicillin was dissolved in 0.2% starch solution; the mixture was soaked in Whatman No. 1 filter paper. When the filter papers were saturated, they were dried and cut into strips; these strips were stored at -20ºC until use. Prior to test, strips were put in desiccators and brought to room temperature. Strips were moisturized with iodine and 2-3 colonies of bacteria were smeared. If the color of the strip changed in 5 min, the bacteria were ß-lactamase positive [30].

3. RESULTS AND DISCUSSION MRSA is a major nosocomial pathogen causing significant morbidity and mortality [31]. RSA were gradually reported [32], whereas MRCoNS have become the predominant pathogen in hospitalized patients with the number of infections caused by these pathogens increased dramatically [33-35]. Presently, we isolated a total of 350 Staphylococcal isolates from different clinical specimens collected from patients. The highest percentage of these isolates was collected from urine samples and the least number of isolates were recovered from blood samples (Table 1).

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Table 1. Distribution of staphylococcus from various clinical specimens Clinical specimens Pus Urine Wound swabs Nasal/eye swabs Blood Sputum Total

Number of isolates 78 88 75 50 34 25 350

Percentage (%) 22.28 25.14 21.42 14.28 9.71 7.14 100

Prevalence and antibiotic susceptibility pattern of various MRSA isolates obtained from different clinical specimens of patients was determined. Out of 350 isolates tested, 245 (70%) were coagulase positive staphylococci and 105 isolates (30%) were coagulase negative staphylococci. Among the 245 coagulase positive staphylococci strains, 148 (60.40) were methicillin resistant S. aureus (MRSA), and out of 105 coagulase negative staphylococci, 46 (43.80%) were methicillin resistant (Table 2). 55% of isolates of S. aureus were found to be methicillin resistant which shows that the prevalence of methicillin resistance is higher than previous reports in Pakistan. The major claim is of 35% MRSA prevalence in Pakistan [36,37]. Whereas Qureshi et al., reported a 28.4% occurrence of MRSA in Rawalpindi [38]. In another multicenter study conducted by Hafiz et al. [39], the prevalence of MRSA strains in various cities of Pakistan was found to be 42%, highest seen in Lahore (61%), closely followed by Karachi (57%), Rawalpindi Islamabad (46%), Peshawar (36%), Azad Kashmir (32%) and Quetta (26%) while minimum resistance was seen in Sukkur (2%). Table 2. Prevalence of MRSA and MRCoNS Bacterial isolates MRSA MRCoNS Total

Resistance to methicillin (%) Resistant Intermediate 148 (60.40) 21 (8.57) 46 (43.80) 13 (12.38) 194 34

Susceptible 76 (31.02) 46 (43.80) 122

The majority of MRSA strains were recovered from wound swabs (39.18%) whereas the MRCoNS strains were isolated from urine samples (34.78%) (Table 3). Table 3. Frequency of MRSA and MRCoNS in clinical specimens Specimens Pus Urine Wound swab Nasal/eye swab Blood Sputum Total

Frequency of MRSA and MRCoNS MRSA MRSA (%) MRCoNS MRCoNS (%) 31 20.94 12 26.08 23 15.54 16 34.78 58 39.18 7 15.21 18 12.16 5 10.86 6 4.05 3 6.52 12 8.10 3 6.52 148 100 46 100

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The antimicrobial susceptibility pattern of MRSA and MRCoNS isolates against agents of different classes (Table 4). The drug resistance patterns of MRSA isolated from clinical specimens was found to be highly variable. All the 148 MRSA strains were resistant to penicillin and oxacillin (100%), followed by cephalothin and nalidixic acid (89.18%), cotrimoxazole (86.48%), erythromycin (85.81%), cephalaxin and cephradine (83.10%), levofloxacin (80.40%), imipenem (77.70%), gentamicin (76.35%), tetracycline (59.45%), ciprofloxacin (44.59%), chloramphenicol (18.24%) and rifampicin (10.13%). The MRCoNS strains also showed closely similar drug resistance pattern with 45 isolates out of 46 (97.82%) being resistant to penicillin, followed by oxacillin (95.65%), cephalothin (86.95%), cephradine (82.60%), levofloxacin and nalidixic acid (80.43%), erythromycin, cephalaxin and imipenem (78.26%), cotrimoxazole (73.91%), gentamicin (69.56%), ciprofloxacin and tetracycline (63.04%), chloramphenicol (13.04%) and rifampicin (6.52%). However, all MRSA and MRCoNS strains tested in this study were recorded sensitive to vancomycin (100%). Table 4. Antibiotic resistance pattern of MRSA and MRCoNS Antibiotics Penicillin Oxacillin Gentamicin Erythromycin Cotrimoxazole Ciprofloxacin Vancomycin Cephalaxin Cephalothin Cephradine Imipenem Levofloxacin Tetracycline Rifampicin Nalidixic acid Chloramphenicol

Percent of isolates resistant to antibiotics MRSA (n=148) MRSA (%) MRCoNS (n=46) 148 100 45 148 100 44 113 76.35 32 127 85.81 36 128 86.48 34 66 44.59 29 0 00 0 123 83.10 36 132 89.18 40 123 83.10 38 115 77.70 36 119 80.40 37 88 59.45 29 15 10.13 03 132 89.18 37 27 18.24 06

MRCoNS (%) 97.82 95.65 69.56 78.26 73.91 63.04 00 78.26 86.95 82.60 78.26 80.43 63.04 6.52 80.43 13.04

Thus, we found all isolates of MRSA resistant to multiple antibiotics tested. Isolates exhibited resistance towards various antibiotics such as cephalosporins, tetracycline and gentamicin which is almost similar to previous reports [40-42]. In another study James and Reeves [43], found MRSA strains resistant to first, second, third and fourth generation of cephalosporins. Presently, 83% of the MRSA and 82% MRCoNS isolates showed resistance against cephradine. Mahmood et al. [44] reported 29% resistance of S. aureus against first generation cephalosporins. Gentamicin is an amioglycoside and is most often prescribed because of its low cost and synergistic activity with ß-lactum antibiotics. In the present study 76.35% of MRSA and 69.56% of MRCoNS showed resistance towards gentamicin which is higher than reported earlier 30% [45]. Rifampicin is a drug considered suitable for treatment of MRSA infection [14,46,47]. In this study MRSA resistance to rifampicin is found 10.13% and that of MRCoNS is found 6.52%. Yameen et al. [48] reported MRSA resistance of 14% towards rifampicin. In this study 85.81% of MRSA were resistant to erythromycin, which is comparable to previous reports [9,38]. Among fluoroquinolones, ciprofloxacin and 203


levofloxacin tested, the percentage resistance found in MRSA and MRCoNS was 44.59 and 63.04% for ciprofloxacin and 80.40 and 80.43% for levofloxacin respectively. Previously reported resistance of ciprofloxacin shows the similar type of pattern [49,50]. Since the emergence of methicillin resistant S. aureus, the glycopeptides vancomycin has been the only effective treatment for MRSA infections [51]. In the present study all the MRSA and MRCoNS isolates were susceptible to vancomycin. These results coincide with the findings of Mitchell et al. [52]. Multi-drug resistance in this study was taken as resistance to three or more of the twelve antimicrobial drugs tested. Of the 148 MRSA strains isolated, 86 strains (58.10%) were found to be multidrug resistant, whereas 15 (32.60%) out of total 46 MRCoNS strains were found to be multidrug resistant (Table 5). Application of ß-lactamase production method revealed that 84% of MRSA and 87% of MRCoNS strains tested positive (Table 5). Multidrug resistance rates in our MRSA and MRCoNS isolates were, 58.10 and 32.60%, respectively. Other published reports have indicated a closely similar or higher percentage of resistance [53-55]. In our study the ß-lactamase production rates found were 84 and 87% for MRSA and MRCoNS respectively, these results are similar to the findings of Paradisi et al. [51], Ang et al. [56] and Olowe et al. [57]. Table 5. Detection of multi-drug resistance and ß-lactamases production Bacterial isolates MRSA MRCoNS Total

No. of isolates and percentage of multi-drug resistance Total MDR Percentage 148 86 58.10 46 15 32.60 194 101 -

ß-lactamases detection (percentage) 84 87 -

The MIC values of MRSA were determined against antibiotics includes vancomycin, tetracycline, rifampicin and gentamicin. The MIC of vancomycin for MRSA isolates ranged from 1-5 µg/ml; 88% isolates were inhibited at concentration of ≤2 µg/ml, and 12% at 5 µg/ml. These ranges of vancomycin MICs are higher than the previously reported ranges. Denis et al. (2006) reported 100% inhibition at concentration of 1 µg/ml and Lozniewski et al. (2001) reported MRSA inhibition at concentration of 0.5-1 µg/ml. Higher MICs for vancomycin against MRSA is an alarming sign of development of infections with vancomycin resistant S. aureus (VRSA) [58,59]. For tetracycline the MIC ranged from 8-131 µg/ml; 37% isolates were inhibited at ≤20 µg/ml, 16% at 32 µg/ml and 47% at ≥65 µg/ml. For rifampicin the MIC value ranged from 1-38 µg/ml; 62% isolates were inhibited at 1 µg/ml, 23% at