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QC Report - Agilent Technologies : 2 Color CGH Grid Normal Note ...

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QC Report - Agilent Technologies : 2 Color CGH. Date. Friday, January 17, 2014 - 15:26 Sample(red/green). User Name. Administrator FE Version. 11.5.1.1.
QC Report - Agilent Technologies : 2 Color CGH Date User Name Image Protocol Grid Saturation Value DyeNorm List No of Probes in DyeNorm List

Friday, January 17, 2014 - 15:26 Administrator US45103095_256261710002_S01 [2_2] CGH_1105_Oct12 (Read Only) SMH_AU_Conf_110_062617_D_F_20131203 65508 (r), 65507 (g) NA NA

Spot Finding of the Four Corners of the Array

Grid Normal Outlier Numbers with Spatial Distribution 384 rows x 164 columns

Sample(red/green) FE Version BG Method Multiplicative Detrend Dye Norm

11.5.1.1 Detrend on (NegC) True Linear

Evaluation Metrics for CGH_QCMT_Oct12 Excellent (8) ; Good (3) ; Evaluate (1) Metric Name Value Excellent

Good

IsGoodGrid AnyColorPrcntFeatNonU... DerivativeLR_Spread gRepro g_BGNoise g_Signal2Noise g_SignalIntensity rRepro r_BGNoise r_Signal2Noise r_SignalIntensity RestrictionControl

NA 1 to 5 0.20 to 0.30 0.05 to 0.20 5 to 15 30 to 100 50 to 150 0.05 to 0.20 5 to 15 30 to 100 50 to 150 0.80 to 1

1.00 0.05 0.16 0.05 5.29 121.92 645.33 0.05 8.33 100.19 834.33 -1.00

>1 150

Evaluate 5 >0.30 0.20 >15