Rapid micro fluorescence in situ hybridization in ... - AIP Publishing
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BIOMICROFLUIDICS 12, 042212 (2018)
Rapid micro fluorescence in situ hybridization in tissue sections D. Huber and G. V. Kaigalaa) IBM Research – Z€ urich, S€ aumerstrasse 4, 8803 R€ uschlikon, Switzerland (Received 28 January 2018; accepted 29 March 2018; published online 30 May 2018)
This paper describes a micro fluorescence in situ hybridization (lFISH)-based rapid detection of cytogenetic biomarkers on formalin-fixed paraffin embedded (FFPE) tissue sections. We demonstrated this method in the context of detecting human epidermal growth factor 2 (HER2) in breast tissue sections. This method uses a non-contact microfluidic scanning probe (MFP), which localizes FISH probes at the micrometer length-scale to selected cells of the tissue section. The scanning ability of the MFP allows for a versatile implementation of FISH on tissue sections. We demonstrated the use of oligonucleotide FISH probes in ethylene carbonate-based buffer enabling rapid hybridization within