KLK2, KLK3, KLKP1, KLK4, KLK15 rs2664156-C. 5.222 rs4899260. 14q24.1. 14. 68811487. ZFP36L1 rs4899260-A. 6.398 rs4911642. 22q11.1. 22. 15473564.
S6 Table. Risk Variants that have been reported but are not on the IChip
SNPs
Region
rs1020388 rs1032355 rs10439884 rs10886159 rs11984075 rs12734338 rs13010713 rs13128441 rs157640 rs1772408 rs195656 rs1958589 rs2068824 rs2074404 rs2605393 rs2664156 rs4899260 rs4911642 rs4930144
5q11.2 4q23 21p11.1 10q26.11 7p14.1 1q32.1 2q31.3 4p16.2 20q13.2 1q23.1 16q22.2 14q13.1 1q32.1 17q21.31 3p22.3 19q13.33 14q24.1 22q11.1 11p15.5
rs917997 rs975730
2q12.1 8q24.21
Chr_id
Chr_pos
Reported Genes.
5 4 21 10 7 1 2 4 20 1 16 14 1 17 3 19 14 22 11
56264200 99618739 10540506 117854099 37397251 202500595 181131318 5160662 54798000 159035859 71013581 34375170 201625537 46788073 36368109 50873907 68811487 15473564 2027258
2 8
102454108 128303768
ANKRD55 RG9MTD2, C4orf17, MTTP BAGE2, TPTE, BAGE EMX2OS, RAB11FIP2, EMX2 ELMO1 PPP1R12B, SYT2, UBE2T ITGA4, UBE2E3 STK32B DOK5 IFI16 HYDIN EAPP, SNX6, C14orf147 NAV1 Intergenic STAC KLK2, KLK3, KLKP1, KLK4, KLK15 ZFP36L1 CCT8L2, psiTPTE22 IGF2AS, TH, MRPL23, TNNT3, SYT8, ASCL2, TNNI2, LSP1, IGF2, INS, H19 IL18RAP, IL18R1, IL1RL1, IL1RL2 Intergenic
Strongest SNP Risk Allele rs1020388-? rs1032355-C rs10439884-A rs10886159-C rs11984075-G rs12734338-C rs13010713-G rs13128441-C rs157640-G rs1772408-? rs195656-A rs1958589-C rs2068824-C rs2074404-? rs2605393-G rs2664156-C rs4899260-A rs4911642-C rs4930144-A
Pvalue mlog 6.523 5.301 5.699 6.155 7.301 6.523 10.301 5.097 5.301 6.097 5.155 5.398 5.222 6.000 5.222 5.222 6.398 5.301 5.155
rs917997-A rs975730-?
15.000 7.699
