trichorhinophalangeal syndrome I (human). 3.32548. Flg filaggrin. 3.26728. Serpinb3c serine (or cysteine) peptidase inhibitor, clade B, member 3C. 3.06105.
Gli1 Tmem16e Ptch2 Ptch1 Lef1 Scube1 Cxcr4 Tcf7 Rgs2 Id3 Gprasp2 ND6 3110082D06Rik Rhpn2 OTTMUSG00000003947 Sphkap E030049G20Rik Agrp Col8a1 6430704M03Rik Itgbl1 Dkk4
2.96841
2.94604
2.93823
2.37934
2.28
1.73363
1.71949
1.67796
1.58511
1.55928
1.55348
1.52913
1.52651
1.51829
1.50677
0.63035
0.59259
0.5918
0.57492
0.56103
0.48527
0.05291
Full Name
dickkopf homolog 4 (Xenopus laevis)
integrin, beta-like 1
RIKEN cDNA 6430704M03 gene
collagen, type VIII, alpha 1
agouti related protein
RIKEN cDNA E030049G20 gene
SPHK1 interactor, AKAP domain containing
predicted gene, OTTMUSG00000003947
rhophilin, Rho GTPase binding protein 2
RIKEN cDNA 3110082D06 gene
NADH dehydrogenase subunit 6
G protein-coupled receptor associated sorting protein 2
inhibitor of DNA binding 3
regulator of G-protein signaling 2
transcription factor 7, T-cell specific
chemokine (C-X-C motif) receptor 4
signal peptide, CUB domain, EGF-like 1
lymphoid enhancer binding factor 1
patched homolog 1
patched homolog 2
transmembrane protein 16E
GLI-Kruppel family member GLI1
leucine-rich repeat-containing G protein-coupled receptor 6
dickkopf homolog 1 (Xenopus laevis)
sonic hedgehog
A030013N09Rik 1100001G20Rik AW121567 Dkk1 Fgf20
11.01398
10.78177
5.34283
5.22339
59.79099
16.6657
Gene Symbol Shh
FoldChange (Ta/TaDk4TG)
fibroblast growth factor 20
dickkopf homolog 1 (Xenopus laevis)
expressed sequence AW121567
RIKEN cDNA 1100001G20 gene
RIKEN cDNA A030013N09 gene
sonic hedgehog
Full Name
The full list of differentially expressed genes between Ta and TaDk4TG skin at E17.5
Dkk1 Lgr6
3.84644
27.56013
4.6255
Gene Symbol Shh
FoldChange (Ta/TaDk4TG)
Fig S2 Cui-Fig S2 The full list of differentially expressed genes between Ta and TaDk4TG skin at E16.5
Serpinb3c Ndph Flg2 Spink3 Krt79 Cnnm1 Tcf7 Lef1 2610307P16Rik Slc45a2 Cxcr4 Alox12e A330094K24Rik Nsg2 Etv4 Sostdc1 Srcs3 A430010J10Rik Rhpn2 Has3 Zfp64 Plau Hhip I830077J02Rik
3.26728
3.06105
3.01533
2.89009
2.54031
2.48165
2.42795
2.4038
2.31573
2.31315
2.31203
2.3092
2.30675
2.29725
2.27821
2.19262
2.18861
2.14246
2.12471
2.06175
2.00515
1.99457
1.9548
1.95286
Gli1
3.98576
Flg
Edar
4.16365
3.32548
Mup2
4.32188
Trps1
Ptch2
4.41451
3.70205
Slco4a1
4.44522
Clec12b
Padi1
4.46346
Lhx2
Ptch1
4.95162
3.84563
Galnt9
5.081
3.8796
Hes5
5.17881
RIKEN cDNA I830077J02 gene
Hedgehog-interacting protein
plasminogen activator, urokinase
zinc finger protein 64
hyaluronan synthase 3
rhophilin, Rho GTPase binding protein 2
RIKEN cDNA A430010J10 gene
v-src suppressed transcript 3
sclerostin domain containing 1
ets variant gene 4 (E1A enhancer binding protein, E1AF)
neuron specific gene family member 2
RIKEN cDNA A330094K24 gene
arachidonate lipoxygenase, epidermal
chemokine (C-X-C motif) receptor 4
solute carrier family 45, member 2
RIKEN cDNA 2610307P16 gene
lymphoid enhancer binding factor 1
transcription factor 7, T-cell specific
cyclin M1
keratin 79
serine peptidase inhibitor, Kazal type 3
filaggrin family member 2
Norrie disease homolog
serine (or cysteine) peptidase inhibitor, clade B, member 3C
filaggrin
trichorhinophalangeal syndrome I (human)
LIM homeobox protein 2
C-type lectin domain family 12, member B
GLI-Kruppel family member GLI1
ectodysplasin-A receptor
major urinary protein 2
patched homolog 2
solute carrier organic anion transporter family, member 4a1
peptidyl arginine deiminase, type I
patched homolog 1
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9
hairy and enhancer of split 5 (Drosophila)
Nkd1 Rtp4 Slc22a4 Gem Col23a1 Grasp Lypd1 Mlana A730089K16Rik Ovol2 Cdh3 Chst2 Amdhd1 2310015K22Rik Mmp3 D630040I23Rik 2010300C02Rik Loxl4 2900022M12Rik Rac3 Sox4 Slc24a5 Ell3 Gabrp Egfl6 A430107O13Rik Hist3h2ba Tpbg 3110043A19Rik EG236749 Lrp4 Efnb3 Glis1 Slitrk6 Lamc2
1.86165
1.84241
1.82414
1.81865
1.80932
1.79447
1.79026
1.77244
1.76397
1.76164
1.74863
1.74705
1.74002
1.71647
1.71238
1.71204
1.70802
1.70405
1.69401
1.69388
1.69205
1.69154
1.67769
1.66987
1.66809
1.66639
1.64445
1.64164
1.63627
1.62904
1.6271
1.62576
1.6245
1.62433
4933417O08Rik
1.8817
1.8687
Kcnh3
1.90941
potassium voltage-gated channel, subfamily H (eag-related), member 3
laminin, gamma 2
SLIT and NTRK-like family, member 6
GLIS family zinc finger 1
ephrin B3
low density lipoprotein receptor-related protein 4
predicted gene, EG236749
RIKEN cDNA 3110043A19 gene
trophoblast glycoprotein
histone cluster 3, H2ba
RIKEN cDNA A430107O13 gene
EGF-like-domain, multiple 6
gamma-aminobutyric acid (GABA-A) receptor, pi
elongation factor RNA polymerase II-like 3
solute carrier family 24, member 5
SRY-box containing gene 4
RAS-related C3 botulinum substrate 3
RIKEN cDNA 2900022M12 gene
lysyl oxidase-like 4
RIKEN cDNA 2010300C02 gene
RIKEN cDNA D630040I23 gene
matrix metallopeptidase 3
RIKEN cDNA 2310015K22 gene
amidohydrolase domain containing 1
carbohydrate sulfotransferase 2
cadherin 3
ovo-like 2 (Drosophila)
RIKEN cDNA A730089K16 gene
melan-A
Ly6/Plaur domain containing 1
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
collagen, type XXIII, alpha 1
GTP binding protein (gene overexpressed in skeletal muscle)
solute carrier family 22 (organic cation transporter), member 4
receptor transporter protein 4
naked cuticle 1 homolog (Drosophila)
RIKEN cDNA 4933417O08 gene
2010010I01Rik Cbr2 S100a4 Pitx2 Kcnj4 Pgbd5 Rasl11b 6330514A18Rik Hs3st6 LOC230628 Rgs2 Wif1 Sh3rf2 Lama5 Cpne8 Sox21 Cacna1g Ovol1 Cpsf4l Abr Esr1 Smox Mycl1 Iqcd Cthrc1 Snca Sgk1 Larp2 Gsta4 Slc24a3 Anxa3 Sned1 Cfh Csrp2 Rasd1 Gpr111 Slc4a8
1.62325
1.62319
1.62138
1.62138
1.60289
1.59697
1.59168
1.58993
1.58678
1.58566
1.57204
1.5585
1.55522
1.53956
1.53213
1.52077
1.51411
1.51177
1.51176
1.50936
1.50716
1.50445
1.50064
1.50027
0.66062
0.65447
0.64137
0.63009
0.62868
0.62443
0.61669
0.6023
0.59123
0.59087
0.58258
0.58174
0.57106
solute carrier family 4 (anion exchanger), member 8
G protein-coupled receptor 111
RAS, dexamethasone-induced 1
cysteine and glycine-rich protein 2
complement component factor h
sushi, nidogen and EGF-like domains 1
annexin A3
solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
glutathione S-transferase, alpha 4
La ribonucleoprotein domain family, member 2
serum/glucocorticoid regulated kinase 1
synuclein, alpha
collagen triple helix repeat containing 1
IQ motif containing D
v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
spermine oxidase
estrogen receptor 1 (alpha)
active BCR-related gene
cleavage and polyadenylation specific factor 4-like
OVO homolog-like 1 (Drosophila)
calcium channel, voltage-dependent, T type, alpha 1G subunit
SRY-box containing gene 21
copine VIII
laminin, alpha 5
SH3 domain containing ring finger 2
Wnt inhibitory factor 1
regulator of G-protein signaling 2
similar to C05G5.5
heparan sulfate (glucosamine) 3-O-sulfotransferase 6
RIKEN cDNA 6330514A18 gene
RAS-like, family 11, member B
piggyBac transposable element derived 5
potassium inwardly-rectifying channel, subfamily J, member 4
paired-like homeodomain transcription factor 2
S100 calcium binding protein A4
carbonyl reductase 2
RIKEN cDNA 2010010I01 gene
Atp1b1 Krt19 Gpx3 3110079O15Rik C130073F10Rik Lce3f 2300002M23Rik Dkk4 Saa1 Col2a1 Fetub 2310057N15Rik EG546672 2310034C09Rik 4930553J12Rik EG433047 Krtap13
0.28452
0.08519
0.0789
0.07081
0.0645
0.06245
0.05194
0.02967
0.02438
0.0168
0.00245
0.00212
0.00193
0.00185
0.00154
0.00112
1110017D15Rik
0.38408
0.32948
Cadps
0.41628
Sgk2
Slc39a8
0.43477
AA467197
C430042M11Rik
0.43757
0.3321
BC038167
0.4605
0.35727
Mx1
0.4605
Apol7a
Car2
0.48313
0.36671
Grid2
0.50143
Tubb3
Srd5a2l2
0.50632
Scgn
Ramp3
0.53037
0.37594
Tgfa
0.53392
0.3789
EG244911
0.54534
keratin associated protein 13
predicted gene, EG433047
RIKEN cDNA 4930553J12 gene
RIKEN cDNA 2310034C09 gene
predicted gene, EG546672
RIKEN cDNA 2310057N15 gene
fetuin beta
collagen, type II, alpha 1
serum amyloid A 1
dickkopf homolog 4 (Xenopus laevis)
RIKEN cDNA 2300002M23 gene
late cornified envelope 3F
RIKEN cDNA C130073F10 gene
RIKEN cDNA 3110079O15 gene
glutathione peroxidase 3
keratin 19
ATPase, Na+/K+ transporting, beta 1 polypeptide
serum/glucocorticoid regulated kinase 2
expressed sequence AA467197
apolipoprotein L 7a
secretagogin, EF-hand calcium binding protein
tubulin, beta 3
RIKEN cDNA 1110017D15 gene
Ca2+-dependent secretion activator
solute carrier family 39 (metal ion transporter), member 8
RIKEN cDNA C430042M11 gene
cDNA sequence BC038167
myxovirus (influenza virus) resistance 1
carbonic anhydrase 2
glutamate receptor, ionotropic, delta 2
steroid 5 alpha-reductase 2-like 2
receptor (calcitonin) activity modifying protein 3
transforming growth factor alpha
predicted gene, EG244911
