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Table 1: Number of models containing a parameter and normalized relative variable importance (RVI) for all parameters characterizing SNVs, considering.

Table 1: Number of models containing a parameter and normalized relative variable importance (RVI) for all parameters characterizing SNVs, considering 454, Ion Torrent and Illumina NextSeq sequencing data. Parameter 454 Ion Torrent Illumina ]models RVI ]models RVI ]models RVI Q 301 2.04 837 0.6 142 4.12 DP 571 0.58 773 0.61 348 0.29 QD 171 1.73 477 0.81 0 0 Cov total 348 1.01 694 1 219 1.15 347 1.01 693 1 219 1.14 Cov ref Cov vcf 303 0.81 361 0.55 170 0.32 AF total 238 0.71 468 0.78 0 0 247 0.74 467 0.78 0 0 AF ref AF vcf 361 1 612 0.69 0 0 SB 353 0.38 264 0.17 277 0.44 445 0.85 75 0.7 142 2.12 SB vcf SOR 172 0.8 1595 1.26 148 0.56 VP 600 0.67 834 0.63 258 0.41 V P vcf 202 0.93 523 0.83 291 0.73 BQ 569 0.84 623 0.73 260 0.66 BQ vcf 58 2.91 564 0.8 260 1.08 MQ 693 1.07 467 0.76 330 1.20 M QRank 185 0.45 1081 0.84 186 0.30 Altogether 1571 2181 847

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