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Table S2. List of downregulated genes. - Plos
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Table S2. List of downregulated genes. - Plos
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List of downregulated
genes
.
Gene
symbol. Entrez
gene
ID. Factor (RMA) ....
selp
. 6403. 0.48. 0.45 sema6a. 57556. 0.43. 0.39 serpinb2. 5055. 0.40. 0.39 sesn3.
Table S2. List of downregulated genes. Gene symbol
Entrez gene ID
Factor (RMA) 1
Factor (Iter-PLIER) 2
abcg2 acat2 ace adamts1 adamts18 adamts9 anln apobec3b asf1b aspm aurka aurkb bmper brca1 brip1 bub1 bub1b c12orf48 c12orf5 c14orf145 c7 casc5 ccna2 ccnb1 ccnb2 ccnd1 ccne2 cdc2 cdc20 cdc45l cdc6 cdca2 cdca8 cdh11 cdkn3 cenpe cenpf cenpi cenpk cep55 ckap2 ckap2l cks2 clspn cmah crot cyp1a1
9429 39 1636 9510 170692 56999 54443 9582 55723 259266 6790 9212 168667 672 83990 699 701 55010 57103 145508 730 57082 890 891 9133 595 9134 983 991 8318 990 157313 55143 1009 1033 1062 1063 2491 64105 55165 26586 150468 1164 63967 8418 54677 1543
0.44 0.47 0.46 0.31 0.43 0.35 0.32 0.34 0.21 0.35 0.41 0.50 0.40 0.41 0.37 0.36 0.29 0.37 0.36 0.49 0.45 0.31 0.38 0.37 0.34 0.45 0.33 0.38 0.28 0.32 0.18 0.37 0.40 0.39 0.46 0.43 0.36 0.33 0.30 0.30 0.40 0.36 0.36 0.40 0.42 0.45 0.47
0.38 0.39 0.31 0.21 0.40 0.31 0.30 0.35 0.14 0.30 0.30 0.32 0.14 0.29 0.30 0.35 0.26 0.29 0.35 0.46 0.41 0.28 0.36 0.33 0.31 0.40 0.30 0.36 0.27 0.17 0.13 0.25 0.37 0.37 0.35 0.32 0.33 0.27 0.29 0.24 0.39 0.31 0.36 0.14 0.34 0.44 0.40
depdc1 dhcr24 dlgap5 dpp4 dtl eif4h elmod1 elovl6 entpd1 ephx1 exo1 fabp4 fam111b fam40b fam83d fancd2 fbxo5 fen1 flrt2 foxm1 fus gimap7 gins1 gins2 gins3 gja4 glt8d2 gmnn gsdmc gucy1a3 hells hist1h1a hist1h1b hist1h2al hist1h2bf hist1h2bm hist1h3a hist1h3b hist1h3c hist1h3h hist1h3j hist2h2ab hjurp hmmr hmox1 hnrnpm hspa1a hspa4l hsph1 ifit2 il1r1 KIAA0101
55635 1718 9787 1803 51514 7458 55531 79071 953 2052 9156 2167 374393 57464 81610 2177 26271 2237 23768 2305 2521 168537 9837 51659 64785 2701 83468 51053 56169 2982 3070 3024 3009 8332 8343 8342 8350 8358 8352 8357 8356 317772 55355 3161 3162 4670 3303 22824 10808 3433 3554 9768
0.31 0.22 0.31 0.39 0.18 0.35 0.38 0.31 0.41 0.44 0.34 0.21 0.17 0.47 0.32 0.42 0.45 0.50 0.39 0.38 0.45 0.41 0.25 0.25 0.43 0.33 0.35 0.50 0.48 0.39 0.42 0.24 0.33 0.33 0.48 0.26 0.31 0.26 0.30 0.36 0.33 0.48 0.49 0.35 0.40 0.49 0.27 0.44 0.43 0.47 0.37 0.32
0.27 0.22 0.27 0.34 0.15 0.35 0.13 0.23 0.39 0.36 0.13 0.21 0.06 0.36 0.26 0.30 0.40 0.37 0.39 0.29 0.41 0.39 0.21 0.18 0.37 0.26 0.31 0.35 0.36 0.31 0.34 0.22 0.30 0.32 0.48 0.26 0.30 0.24 0.29 0.31 0.24 0.47 0.40 0.26 0.31 0.36 0.27 0.41 0.42 0.36 0.31 0.32
KIAA0746 KIAA1524 kif11 kif14 kif15 kif18a kif20a kif20b kif23 kif2c kif4a lrcc17 map2k6 matn2 mcm10 mcm4 mcm6 melk mettl7a mki67 mlf1ip mybl2 nav3 ncapd3 ncapg ncaph ndc80 neil3 nlgn1 nme1 nqo1 nuf2 nusap1 oas1 pbk pcna pde1a pik3c2b pik3r3 pla2g4a plk1 plk4 pole2 pop1 postn ppfibp2 prc1 prkcdbp prnd prr11 psat1 ptpn13
23231 57650 3832 9928 56992 81930 10112 9585 9493 11004 24137 10234 5608 4147 55388 4173 4175 9833 25840 4288 79682 4605 89795 23310 64151 23397 10403 55247 22871 4830 1728 83540 51203 4938 55872 5111 5136 5287 8503 5321 5347 10733 5427 10940 10631 8495 9055 112464 23627 55771 29968 5783
0.44 0.37 0.28 0.47 0.40 0.41 0.30 0.42 0.40 0.45 0.38 0.35 0.49 0.39 0.33 0.35 0.40 0.28 0.24 0.29 0.35 0.32 0.45 0.45 0.29 0.34 0.32 0.46 0.47 0.48 0.22 0.38 0.30 0.49 0.21 0.37 0.43 0.47 0.15 0.50 0.40 0.48 0.29 0.44 0.28 0.50 0.34 0.45 0.41 0.42 0.33 0.39
0.42 0.29 0.29 0.36 0.30 0.33 0.28 0.34 0.34 0.33 0.31 0.33 0.34 0.38 0.15 0.21 0.38 0.25 0.18 0.26 0.24 0.26 0.41 0.37 0.22 0.24 0.25 0.34 0.43 0.45 0.21 0.32 0.30 0.31 0.20 0.26 0.28 0.41 0.14 0.48 0.36 0.42 0.21 0.30 0.17 0.35 0.32 0.41 0.31 0.40 0.33 0.29
pttg1 racgap1 rad51 rad51ap1 rfc3 rgs4 rgs5 rrm2 sell selp sema6a serpinb2 sesn3 sgk3 sgol1 sgol2 shcbp1 ska1 ska3 slc40a1 slc43a2 slc7a11 scl7a8 slc9a9 sort1 spag5 spc25 stat1 steap1 steap1b steap2 stil tacc3 tcf19 tfec tfrc tk1 tmem106c tmem154 tmem19 tnfsf18 top2a tox tpx2 trim2 trip13 tsen15 tspan5 ttk txnip tyms ube2t
9232 29127 5888 10635 5983 5999 8490 6241 6402 6403 57556 5055 143686 23678 151648 151246 79801 220134 221150 30061 124935 23657 23428 285195 6272 10615 57405 6772 26872 256227 261729 6491 10460 6941 22797 7037 7083 79022 201799 55266 8995 7153 9760 22974 23321 9319 116461 10098 7272 10628 7298 29089
0.44 0.46 0.42 0.30 0.37 0.29 0.44 0.28 0.32 0.48 0.43 0.40 0.39 0.49 0.31 0.37 0.25 0.30 0.37 0.41 0.47 0.45 0.39 0.47 0.45 0.41 0.26 0.42 0.35 0.45 0.35 0.40 0.48 0.48 0.49 0.32 0.41 0.49 0.37 0.49 0.41 0.33 0.44 0.30 0.48 0.37 0.42 0.49 0.43 0.26 0.34 0.37
0.41 0.38 0.34 0.22 0.33 0.30 0.40 0.26 0.15 0.45 0.39 0.39 0.37 0.43 0.25 0.28 0.18 0.21 0.36 0.39 0.32 0.46 0.22 0.25 0.40 0.31 0.20 0.44 0.31 0.46 0.29 0.37 0.28 0.19 0.38 0.34 0.23 0.47 0.13 0.42 0.40 0.31 0.42 0.30 0.37 0.34 0.40 0.48 0.33 0.28 0.33 0.32
ucp2 uhrf1 wdhd1 zwilch zwint
7351 29128 11169 55055 11130
1
Fold reduction as predicted by RMA.
2
Fold reduction as predicted by Iter-PLIER.
0.42 0.24 0.43 0.48 0.30
0.33 0.15 0.38 0.44 0.17
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