Mooney, Dr. Sofie Sjogersten and Dr. Debbie Sparkes for their excellent ... operation throughout my PhD study especially for training with X-ray CT, Dr. Brian.
THE IMPACT OF CONSERVATION TILLAGE ON SOIL QUALITY AND POTENTIAL FOR CLIMATE CHANGE MITIGATION
Shamsudheen Mangalassery, M.Sc. (Agri.)
Thesis submitted to the University of Nottingham for the degree of Doctor of Philosophy 2013
Abstract Conservation tillage is generally considered as an important component of sustainable agriculture. The benefits of conservation tillage have been presented as reducing runoff, enhancing water retention and preventing soil erosion. There is also general agreement that it can be used to conserve and enhance soil organic carbon levels to some extent. However, its applicability in mitigating climate change has been extensively debated, especially when the whole profile of carbon in soil is considered along with a reported risk of enhanced N2O emissions under conservation tillage. The suitability of conservation tillage in mitigating climate change and enhancing carbon sequestration is addressed in this research in an integrated approach combining characterisation of the soil porous architecture and other chemical and biological properties. Novel analytical tools such as X-ray Computed Tomography were used to characterise the 3-D soil pore network under conservation tillage for the first time. The study indicated zero tilled soils had a lower net emission of greenhouse gases on a CO2 equivalent basis indicating potentially zero tillage can be used to mitigate climate change. The net global warming potential under conventional tillage was 20% higher than zero tilled soil. A model developed to predict the greenhouse gas emissions from soil found that soil pore characteristics such as porosity played a significant role in the emission of greenhouse gases such as CO2 and CH4 among other factors such as microbial biomass carbon, bulk density and shear strength. Soil porosity alone accounted for 39.7% of the total variation for CO2 flux which was larger than any other parameter including microbial biomass carbon and soil carbon. Soil pore characteristics were revealed as one of the important determinant in aiding the GHG flux in soil. However N2O emission from soil
I
was mainly dependent on soil moisture, microbial biomass carbon and microbial biomass nitrogen. It was also found that zero tilled soils contained 9% more soil carbon and 30% higher microbial biomass carbon than the tilled soil. It was found that tillage mediated aggregate changes could bring changes in carbon storage in soil depending on texture of soil. Increased microbial activity was evident at zero tilled soils as observed from the increased activities of hydrolysing and oxidising enzymes. The preservation of aromatic structures during
residue
decomposition
might
have
contributed
to
enhanced
sequestration of carbon under zero tilled soils as revealed by the FTIR data. The study indicates that soil management practices strongly influence other properties and by making a suitable choice of the tillage system, a comparative reduction in greenhouse gas emissions could be achieved at the same time enhancing sequestration of carbon.
II
Publications from this work Peer reviewed publications included in the thesis Mangalassery S, Sjögersten S, Sparkes DL, Sturrock CJ, Mooney SJ (2013) The effect of soil aggregate size on pore structure and its consequence on emission of greenhouse gases. Soil and Tillage Research, 132, 3946. Mangalassery S, Sjögersten S, Sparkes DL, Sturrock CJ, Craigon J, Mooney SJ (2013) To what extent can zero tillage lead to a reduction in greenhouse gas emissions?
Abstract of papers presented in seminars (not included in this thesis) Mangalassery S, Sjogersten S, Sparkes DL, Sturrock C, Mooney SJ (2012a) In 4th International Congress of European Confederation of Soil Science Societies (Eurosoil 2012)-Soil Science for the benefit of mankind and environment Bari, Italy. Mangalassery S, Sjogersten S, Sparkes DL, Sturrock C, Mooney SJ (2012b) In British Society of Soil Science Annual Meeting 2012. University of Nottingham, Sutton Bonington Campus, Sutton Bonington, Leicestershire.
III
Acknowledgements I wish to express my deep sense of gratitude and indebtedness to Prof. Sacha Mooney, Dr. Sofie Sjogersten and Dr. Debbie Sparkes for their excellent guidance and constant encouragement throughout the period of my PhD and the training they have given to develop professional academic skills. It was indeed great pleasure and privilege studying under their guidance. I am grateful to all technical staff that helped me to complete this work in time; John Corrie and Darren Hepworth for their support for laboratory work, purchase, training and administrative help, John Alcock and William Donger for sampling help at Sutton Bonington and Julietta Marquez and Neil Saunders. I am extremely thankful to Emma Hooley for the excellent administrative support rendered. All the staff members and colleagues were always helpful and friendly to me and many thanks for that. The help I received for field sampling from Boris Lazarevic and Aveen Khalil is thankfully acknowledged. I am overwhelmed with sincere feelings of indebtedness to my beloved, parents, brothers, sisters, brother-in-laws and sister-in-laws for their abundant love and affection showered on me, which inspired me in completing my studies. I heartily express my special thanks to Dr. Craig Sturrock for his help and cooperation throughout my PhD study especially for training with X-ray CT, Dr. Brian Atkinson for training to use gas chromatography and Dr. Sarah Martin for helping with Biolog ecoplating. I am grateful to the Indian Council of Agricultural Research, New Delhi for providing financial assistance in the form of International Fellowship and to the University of Nottingham for providing International Research Excellence Scholarship without which it could not have been possible to pursue my PhD at this prestigious University and also to the British Society of Soil Science for providing travel grants to attend conferences. I express my sincere gratitude to the Director, Central Arid Zone Research Institute, Jodhpur for granting me permission to pursue PhD studies. I am extremely thankful to my lovely wife Sanu and cute daughters Munny and Minu for their love and support throughout my studies. Any omission in this brief acknowledgement does not mean lack of gratitude.
AUGUST, 2013
(SHAMSUDHEEN M)
IV
CONTENTS Abstract
I
Publications from this work
III
Acknowledgements
IV
Abbreviations and acronyms
X
List of tables
XII
List of figures
XIV
Dedication
XXII
1.
CHAPTER 1: GENERAL INTRODUCTION
1
1.1
Rationale
1
1.2
Literature Review
3
1.2.1
Introduction
5
1.2.2
Materials and methods
8
1.2.3
Conservation tillage and soil properties
10
1.2.4
Climate change and greenhouse gases
11
1.2.5
Sequestration of carbon under conservation tillage
12
1.2.6
Greenhouse gas emission under conservation tillage
25
1.2.7
Soil quality and yield responses under conservation tillage
30
1.3
Research aim and objectives
35
1.4
Thesis structure
36
CHAPTER 2: THE EFFECT OF SOIL TEXTURE AND 48 MANAGEMENT ON SOIL BIOPHYSICAL AND CHEMICAL BEHAVIOUR
2.
2.1
Introduction
48 V
2.2
Materials and methods
49
2.2.1
Field site and sampling
49
2.2.2
X-ray Computed Tomography
50
2.2.3
Carbon dioxide emissions from soil
57
2.2.4
Soil organic matter and microbial biomass carbon
57
2.2.5
Soil physical properties
57
2.2.6
Statistical analysis
57
2.3
Results
58
2.3.1
Soil pH
58
2.3.2
Soil organic matter
58
2.3.3
Soil organic carbon and carbon stock
59
2.3.4
Microbial biomass carbon and nitrogen
60
2.3.5
Hydraulic conductivity, shear strength and ponding limit
62
2.3.6
Bulk density
64
2.3.7
Carbon dioxide emissions
65
2.3.8
Soil structural analysis
66
2.3.9
Relationship between different soil properties
69
2.4
Discussions
70
2.5
Conclusions
73
CHAPTER 3: THE EFFECT OF SOIL AGGREGATE 74 SIZE ON PORE STRUCTURE AND ITS CONSEQUENCE ON EMISSION OF GREENHOUSE GASES
3.
3.1
Introduction
76
3.2
Materials and methods
77
VI
3.2.1
Sample preparation
77
3.2.2
Greenhouse gas emission and soil carbon
77
3.2.3
X-ray Computed Tomography (CT)
77
3.2.4
Statistical analysis
78
3.3
Results
78
3.3.1
Saturated hydraulic conductivity
78
3.3.2
Soil organic matter
78
3.3.3
Greenhouse gas release
78
3.3.4
Soil pore characteristics
80
3.3.5
Relationship between fluxes of greenhouse gases and soil physical properties
81
3.4
Discussion
81
3.5
Conclusions
82
CHAPTER 4: TO WHAT EXTENT CAN ZERO 84 TILLAGE LEAD TO A REDUCTION IN GREENHOUSE GAS EMISSIONS?
4.
4.1
Introduction
87
4.2
Materials and methods
89
4.2.1
Site selection and sample collection
89
4.2.2
Soil physical properties
93
4.2.3
X-ray Computed Tomography (CT)
93
4.2.4
Soil chemical and biological properties
95
4.2.5
Fluxes of greenhouse gases
95
4.2.6
Statistical analysis
95
4.3
Results 4.3.1
Soil physical properties
96 96
VII
4.3.2
Soil pore characteristics
98
4.3.3
Soil chemical and biological properties
99
4.3.4
Fluxes of greenhouse gases
100
4.3.5
Relationship between greenhouse gas fluxes and soil properties
103
4.4
Discussion
105
CHAPTER 5: MICROBIAL MECHANISMS 113 GOVERNING SOIL CARBON SEQUESTRATION UNDER CONSERVATION TILLAGE IN TEMPERATE SOILS
5.
5.1
Introduction
115
5.2
Materials and methods
118
5.2.1
Sample preparation
118
5.2.2
Soil chemical properties
119
5.2.3
Soil biological properties
119
5.2.4
Statistical analysis
120
5.3
Results
121
5.3.1
Soil chemical properties
121
5.3.2
Soil biological properties
124
5.3.3
Factors affecting carbon content in soil
128
5.4
Discussion
129
5.5
Conclusions
135
6.
CHAPTER 6: CONCLUSIONS
GENERAL
DISCUSSION
AND 141
6.1
Introduction
141
6.2
Effect of tillage/zero tillage on physico-chemical properties
141
VIII
6.3
Physical and microbial basis of carbon sequestration in soil
143
6.4
Climate change mitigation under zero tillage
144
6.5
Zero tillage on soil biological properties
146
6.6
Conclusions
148
6.7
Future work
150
6.7.1
Studies on soil pore characteristics on micro scale
150
6.7.2
Insitu studies in the field involving crop component
150
6.7.3
Effect of conservation tillage on crop yields vis a vis climate change mitigation
151
6.7.4
Carbon sequestration
151
7.
REFERENCES
152
8.
APPENDIX
175
IX
Abbreviations and acronyms µ
Micro
µA
Micro ampere
AWCD
Average well colour development
CH4
Methane
CO2
Carbon dioxide
CT
Computed Tomography
FTIR
Fourier Transform Infrared spectroscopy
g
Gram
GC
Gas chromatography
GE
Glucose equivalents
GHG
Greenhouse gas
GWP
Global warming potential
h
Hour
IPCC
Intergovernmental Panel on Climate Change
kg
kilogram
kPa
kilo Pascal
kV
Kilo volt
L-DOPA
L-3,4-dihydroxy phenylalanine
LSD
Least significant difference
M
Molar
mg
Milligram
min
Minute
mL
Millilitre
X
mM
Milli molar
mM
milli molar
N2O
Nitrous oxide
ng
Nanogram
nm
Nanometre
NMR
Nuclear Magnetic Resonance spectroscopy
PCA
Principal component analysis
PVC
Ploy Vinyl Chloride
s
Seconds
SOC
Soil organic carbon
SOM
Soil organic matter
TPF
Triphenyl formazan
VG
Volume graphics
W
watt
XI
List of Tables Table
Title
number
Page number
Chapter 1 1.1
Area under conservation tillage in different countries
38
1.2
Carbon stock reported under conventional and zero-
39
tillage around the globe 1.3
Reported yields under various crops in no-till and
44
conventional tillage systems 1.4
Soil carbon sequestration rates under conservation 47 tillage
Chapter 2 2.1
Soil organic carbon stock (Mg ha-1) in different soils in 60 Sutton Bonington and Bedford
2.2
CT measured average soil porosity (%), and average 66 pore size (mm2) under different treatments
Chapter 4 4.1
Selected soil and management characteristics of the 110 experimental sites.
4.2
Statistical output from linear mixed modelling (texture,
111
tillage, duration, depth) for the physico-chemical characteristics of soils under zero tillage and conventional tillage (F statistic) 4.3
Selected chemical properties of soils under zero tillage
112
and conventional tillage Chapter 5 5.1
Microbial biomass C (MBC), microbial biomass N 138 (MBN) and total C and N at surface (0-10 cm) and subsurface (10-20 cm) layers under zero tilled and tilled soils
5.2
F statistic from analysis of variance for the absorbance 139 at different wave numbers XII
5.3
CO2 flux, CH4 flux, N2O flux and net global warming 140 potential at surface (0-10 cm) and subsurface (10-20 cm) layers under zero tilled and tilled soils
Appendix A.1
Carbon Sources in Biolog GN2 microtitre plates
186
XIII
List of Figures Figure
Title
Page
number
number
Chapter 1 1.1
Net
sequestration
of
carbon
(Mg
ha-1)
under 14
conservation tillage in comparison to conventional tillage as affected by duration under conservation tillage in tropical and temperate soils. (F1,55 = 1.42, NS overall, F1,16 = 4.40, P