High rate of Intestinal Colonization with Extended Spectrum ß ...

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Jun 18, 2008 - Baran, J. Jr., J. Ramanathan, K. M. Riederer, and R. Khatib. 2002. ... Coque, T. M., A. Oliver, J. C. Perez-Diaz, F. Baquero, and R. Cantón. 2002.
JCM Accepts, published online ahead of print on 18 June 2008 J. Clin. Microbiol. doi:10.1128/JCM.01008-08 Copyright © 2008, American Society for Microbiology and/or the Listed Authors/Institutions. All Rights Reserved.

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High rate of Intestinal Colonization with Extended Spectrum

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ß-Lactamases Producing Organisms in Household Contacts of Infected

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Community Patients

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Aránzazu Valverde,1,2 Fabio Grill,3 Teresa M. Coque,1,2 Vicente Pintado3,

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Fernando Baquero,1,2 Rafael Cantón,1,2* and Javier Cobo3

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Servicio de Microbiología,1 CIBER en Epidemiología y Salud Pública (CIBERESP),2

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and Servicio de Enfermedades Infecciosas3. Hospital Universitario Ramón y Cajal.

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28034-Madrid. Spain

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Running title. ESBL fecal colonization in family groups

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Key words: ESBL, Escherichia coli, household contacts, fecal carriage

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*Corresponding author: R. Cantón. Servicio de Microbiología. Hospital

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Universitario Ramón y Cajal. 28034-Madrid. Spain. Phone: +34913368330; FAX:

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+34913368809; e-mail: [email protected]

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Fecal carriage with extended-spectrum ß-lactamase (ESBL)-organisms was

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detected in 70% of index cases (n=40) with community-acquired infections due to

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ESBL-producers and reached 16.7% in household contacts (n=54). Sixty-six

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percent of ESBL-organisms from index cases were indistinguishable (PFGE) when

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compared with household isolates. Community-patients and their households

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represent a reservoir for ESBL-producers, increasing dispersal of resistance in

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healthy people.

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Extended spectrum ß-lactamase (ESBL) producing organisms have dramatically

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increased worldwide (2,22). This has been associated with efficient dispersion of

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specific clones and plasmids harbouring blaESBL genes (5,6,20). In addition, co-

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resistance to non-ß-lactam antibiotics may have fuelled persistence of ESBL-producing

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isolates, a fact that has been demonstrated in intensive care units (17,19,23). A

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threatening epidemiological problem is the dispersal of ESBL-organisms to healthy

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people in the community, which might depend on the frequency of ESBL-fecal carriers

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as well as their presence in the food chain (15,18,30).

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In a previous study, we demonstrated that nearly 12% of hospitalized patients might

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carry ESBL-producing isolates in the intestinal compartment (32). This colonization has

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been associated with a high risk for developing an infection due to ESBL-producers

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(23,25). This has been scarcely studied in community patients and to a lesser extent in

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healthy subjects (24,32). Moreover, there is little information about the pathways of the

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intestinal colonization. This has been investigated in hospitalized patients and recently

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in outpatients involved in food-borne outbreaks (9,15). In the present study, we

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analysed the fecal carriage with ESBL-producing isolates in a group of patients with

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community-acquired infections (CAIs) due to these organisms and the corresponding

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status of the people living with them (household contacts).

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From April 2004 to June 2005 a total of 299 patients presented an infection or

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colonization process due to an ESBL-producing organism in our institution. Fifty-six

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percent were outpatients and 95% of them had a urinary tract infection. Forty clinical

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samples from 40 patients (index cases, ICs) with CAIs (37 urinary tract infections, 2

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bacteremia, and one soft tissue infection) due to an ESBL-producing E. coli (n=39) or

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Klebsiella pneumoniae (n=1) isolates and fecal samples (one per IC) were studied. Only

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ICs that positively agree to participate in the study and submitted fecal samples were

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enrolled. Thirty-four of the 40 ICs (mean age 63.6 years, range 2-96) were females. In

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addition, 54 fecal samples from 54 household contacts of 29 IC recovered within two-

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weeks of IC enrolment were also studied. The number of household contacts for each IC

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ranged from only one to 7 (mean 2 household per patient). The ethical committee

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approved the study and signed informed consents were obtained.

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Fecal samples were screened for ESBL-producers as previously described (32).

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Bacterial identification was performed by standard methods and CLSI microdilution (4)

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for susceptibility pattern. ESBL characterization was performed by PCR and sequencing

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(6,32,33). Population structure was established by PFGE (32). In addition, phylogenetic

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groups among E. coli isolates were identified by a multiplex PCR (3).

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Twenty-eight out of 40 ICs (70%, CI95%:53.4-83.4) and 9 out of 54 household

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contacts (16.7%; CI95%:6.7-26.1) presented fecal carriage with ESBL-producing E.

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coli isolates (Figure 1). Moreover, 9 ICs out of 29 had at least one colonized household

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contact (31.0%; CI 95%:14.2-47.9). This figure increased (42.1%; CI 95%:19.9-64.3) in

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the subset of household contacts of ICs with fecal carriage (8/19). In contrast, only one

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household contact (1/10, 10%; CI95%:0-28.6) within the subset of those from ICs with

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negative fecal carriage, presented an intestinal colonization of ESBL-producing E. coli

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(Figure 1).

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Characteristics of ESBL-producing isolates from ICs and their corresponding

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household contacts are shown in tables 1 and 2. Seventy-two percent (21/29) of ICs

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presented E. coli clinical isolates with the same PFGE type as those from their fecal

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samples. Moreover, PFGE analysis revealed an indistinguishable pattern among ESBL-

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producing E. coli from ICs (clinical sample or fecal sample) and their corresponding

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household contacts in 66% (6/9) of isolates.

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Overall, ESBL characterization revealed a predominance of CTX-M-14 (57%) and

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SHV-12 (18.6%), the emergence of ESBLs belonging to CTX-M-1 group (7.1%), and a

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small representation of TEM (5.7%) enzymes. This distribution is in agreement with the

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epidemiological situation of ESBL-producing isolates from the community at the time

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of enrollment in our study (2,27,31). It is of note that 2 ICs and 2 household contacts

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were colonized with two different ESBL-producing isolates.

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The present study demonstrates a high rate (70%) of intestinal colonization in

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patients with CAI due to ESBL-producing organisms. The presence of these pathogens

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in the bowel is considered as a risk factor for suffering infections with these bacteria

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(28). Moreover, it can explain the high rates of isolation of ESBL-producing organisms

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in certain anatomic locations (i.e. abdominal and urinary tract infections), than in others

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where there is not a clear implication of endogenous microbiota (28). It is of note that

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our 70% figure is similar to that found in hospitalized patients under high antimicrobial

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selective pressure (17,23). Around 50% of our patients received antimicrobial treatment

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(18 patients) or medical extrahospitalary assistance (22 patients) at least two months

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before ESBL infections which have been defined as risk factors for colonization with

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these pathogens (28).

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An important finding was the high rate (16.7%) of intestinal colonization in

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households of patients suffering CAI with ESBL-producing organisms. This figure is

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higher than that previously found by our group in the same geographic area (3.7%,

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p=0.004, Chi square test) and in other countries (range, 1.7% to 13.1%) in healthy

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individuals (13,21,26,32). These values were even higher (42.1%) in the subset of

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household contacts of ICs with fecal carriage. Despite of potential limitation of our study

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due to the small sample size, these results revealed the importance of the intestinal

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colonization as a reservoir for transmission of resistant bacteria and its potential role as

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traffickers in antibiotic resistance genes (14,29). This has been studied in the

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nosocomial setting where it is generally assumed that for every patient with a clinically

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significant infection with an ESBL-producing organism at least one other patient exists

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in the same unit with intestinal colonization with an ESBL-producer (9,17,22). Data

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from the community remain scarce. It has been shown that methicillin-resistant

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Staphylococcus aureus or vancomycin-resistant enterococci may be acquired from

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different family members (1,10,11) and there is no information contradicting this

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suspicion with ESBL pathogens.

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Patient-to-patient transmission has been demonstrated with ESBL-producing K.

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pneumoniae isolates in the nosocomial setting (7,17,23). In the community, this

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landscape might have also been produced with E. coli (6,8,9,16). In our study, up to

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66% of isolates from ICs and their corresponding households had an indistinguishable

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PFGE pattern. Epidemic plasmids might be responsible for this situation. This

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possibility was studied in different CTX-M-14 producing clones (Valverde et al,

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unpublished data). We cannot rule out a common source as we do not investigate

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ESBL-producing organisms in food or domestic pets. Both have been involved in the

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spread of these pathogens and their corresponding blaESBL genes (12,15,30).

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In summary, high rates of intestinal colonization with ESBL-producing organisms in

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community patients infected with these isolates was observed. Household contacts of

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these patients had high rates of intestinal colonization with ESBL-producing organisms,

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higher than that in outpatients and the general population (32). These results highlight

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that community patients and their households represent a clear reservoir for these

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organisms and the corresponding blaESBL genes. This fact increases the risk of

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dissemination of such organisms to normal healthy people and facilitates the acquisition

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of resistance mechanisms by susceptible bacteria.

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A. Valverde is supported by CIBER-ESP (Network Center for Biomedical Research in

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Epidemiology and Public Health) from Instituto Carlos III, Ministerio de Sanidad y

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Consumo of Spain. F. Grill was supported by “Red Española de Investigación en

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Patología Infecciosa” (REIPI-ISCIII-C03/14) from Instituto Carlos III, Ministerio de

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Sanidad y Consumo of Spain. This study was partially supported by research grants

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from the Ministerio de Sanidad y Consumo, Instituto de Salud Carlos III (PI040162),

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DeReMicrobiana Project of the Madrid Autonomous Community, and the European

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Commission (LSHM-CT-2003-503335).

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We thank Azucena Rollán for her excellent technical work.

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TABLE 1. Characteristics of ESBL-producing isolates from clinical and fecal samples

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of index cases with no household contacts E. coli

Index case IC1

IC2

IC4

IC11

Sample

Organism

Urine

E.coli

CV3C

A

Fecal

E.coli

CV3HC

A

Urine

E.coli

CV12C

D

Fecal

E.coli

CV12C

D

Urine

E.coli

CV16C

Fecal

E.coli

CV16C

Urine

E.coli

CV37C

E C

IC16

IC18

IC19

E.coli

CV39C

E.coli

CTX-M-14 CTX-M-14

CTX-M-14

CV40C

A

CTX-M-14

E.coli

CV40C

A

CTX-M-14

E.coli

CV52C

A

CTX-M-14

Fecal

E.coli

CV52C

A

CTX-M-14

Urine

E.coli

CV59C

B1

CTX-M-14

Fecal

E.coli

CV59C

B1

CTX-M-14

Urine

E.coli

CV77C

B1

CTX-M-14

Fecal

E.coli

CV77C

B1

CTX-M-14

Urine

E.coli

CV80C

B1

CTX-M-14

Fecal

E.coli

CV80HC

B1

CTX-M-14

C A

CV39C

D

CTX-M-14

D

Urine

E.coli

A

CTX-M-14

CTX-M-14

Fecal

IC15

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D E CTX-M-14

D

Urine

CV37HC

A

CTX-M-14

CTX-M-14

Urine

E.coli

CTX-M-14

D

Fecal

IC13

ESBL phylogroup

Fecal

IC12

PFGE

255 256 257 258 259 260 261 12

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TABLE 1 (cont.) E. coli Index case

Sample

Organism

PFGE

ESBL phylogroup

IC7

IC10

IC17

IC20

Urine

E.coli

CV20C

D

CTX-M-14

Fecal

E.coli

CV20S

D

SHV-2

Urine

E.coli

CV29C

B1

Fecal

E.coli

CV29C

B1

Urine

E.coli

CV70C

Fecal

E.coli

CV70C

Urine

E.coli

CV86C

E.coli

CV86C

E.coli

CV14O

E.coli

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Fecal

IC3

CV14H-Da

B1

SHV-12

E.coli

CV17S

B1

SHV-12

E.coli

CV17S

B1

SHV-12

Urine

E.coli

CV24S

A

SHV-12

Fecal

E.coli

CV24S

A

SHV-12

Urine

K. pneumoniae

CV18O

-

TEM-4

Fecal

E.coli

CV18H-Da

B1

SHV-12

Urine

E.coli

CV41T

A

TEM-39

Fecal

E.coli

CV41T

A

TEM-39

Urine

E.coli

CV28C

D

CTX-M-32

Fecal

E.coli

CV28C

D

CTX-M-32

C A IC9

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a.

CTX-M-9

SHV-12

Fecal

IC14

CTX-M-9

B1

Urine

IC6

A

CTX-M-9

CTX-M-9

Fecal

IC8

D

CTX-M-9

D

Urine

IC5

D E

T P D

CTX-M-9

PFGE pattern degradated.

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TABLE 2. Characteristics of ESBL-producing E. coli isolates from all samples of index

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cases and fecal samples from positive ESBL-household contacts

Family

Household contacta

Index case

group (no. of household

Sample

PFGE

Phylogroup

ESBL

Urine

CV5C

D

CTX-M-14

Fecal

CV5C

D

CTX-M-14

Urine

CV34C

A

CTX-M-14

Fecal

b

-

b

-

b

Urine

CV61C

B1

CTX-M-14

Fecal

CV61C

B1

CTX-M-14

Urine

CV64C

A

CTX-M-14

Fecal

CV64C

B1

CTX-M-14

Urine

CV81C

A

CTX-M-14

Fecal

CV81C

A

CTX-M-14

Urine

CV92C

B1

CTX-M-14

Fecal

CV92HC

A

CTX-M-14

PFGE

Phylogroup

contacts) FG1 (1 )

FG2 (1)

FG4 (1)

FG5 (1)

FG7 (1)

E C

C A FG8 (1)

FG9 (1)

FG3 (1)

FG6 (1)

D E

CV5C

D

CTX-M-14

A

CTX-M-14

B1

CTX-M-14

CV64C

B1

CTX-M-14

CV82C

D

CTX-M-14

CV93.1

A

TEM-52

CV93.2

A

TEM-52

CV94S

D

SHV-12

CV44C

A

CTX-M-14

CV68C

D

CTX-M-1

CV69C

D

CTX-M-14

T P -

Urine

CV94S

D

SHV-12

Fecal

CV94S

D

SHV-12

Urine

CV44S

D

SHV-12

Fecal

CV44S

D

SHV-12

CV44C

A

CTX-M-14

Urine

CV68C

D

CTX-M-1

Fecal

CV68C

D

CTX-M-1

267

a.

Isolates of household contacts were obtained from fecal samples;

268

b.

No positive ESBL fecal sample was obtained

269 270 271 272 14

ESBL

CV36C

CV61C

273

FIG 1. Index cases with fecal carriage of ESBL-producing organism and their

274

corresponding household contacts

Index cases: 40

Index case carriage (-): 12

With household contacts: 10

Household contacts carriage (+): 1

D E

Index case carriage (+): 28

Without household contacts: 2

Household contacts carriage (-): 15

With household contacts: 19

T P

Household contacts carriage (+): 8

E C Household contact: 54

C A

Without household contacts: 9

Household contacts carriage (-): 30

Index case: Patient with ESBL-Producing Organism Infection

Index Case Carriage (+) : Patient with ESBL-Producing Organism Infection and fecal positive ESBL culture Household contacts Carriage (+) : Household contacts with positive ESBL-Producing Organism in fecal sample

275

15

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