Maximum parsimony tree showing phylogenetic relationships of the partial 18S ... The tree was constructed with the 376 sequences generated in this study and.
multiple maximum likelihood points may exist for certain phylogenetic trees, most existing phylogenetic construction programs only produce a single best tree.
not only show that a simple two-partition model resolves the phylogeny better than a one-partition model but also ... quences (e.g., Seo and Kishino 2008, 2009; Anisimova and .... multiple partitions fitted the best for all MSAs in L60p30. In.
Figure S1. Maximum likelihood phylogenetic tree of cultivated thermophilic species of Crenarchaeota based on SSU rRNA sequences.The type of metabolism is indicated for each species based on oirginal species description literature [summarized in Stackebrandt E, Huber H, Schumann P, Stetter KO, Goodfellow M, et al. (2006) The Prokaryotes. New York: Springer]. Species for which no metabolic information was available are in black. The numbers indicate bootstrap support values, based on 100 replicates. Where the value was
