Multiple Sequence Alignment Lec3: From Clustal Omega to Jalview

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Multiple Sequence Alignment. Introduction to Bioinformatics online course: IBT_2016. Lec3: From Clustal Omega to Jalview. By. Ahmed Mansour Alzohairy.
Introduction to Bioinformatics online course: IBT_2016

Multiple Sequence Alignment Lec3: From Clustal Omega to Jalview By Ahmed Mansour Alzohairy Professor (Full) at Department of Genetics, Zagazig University, Zagazig, Egypt 2016 Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Collect Your Sequences in FASTA format in one text file

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Login Clustal Omega and past your sequences and choose the type of your input http://www.ebi.ac.uk/Tools/msa/clustalo/

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Download the alignment file on the Desktop

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Open Jalview and load your sequence file

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Choose the best color for represent your sequence

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Export your Alignment to an Image for publication

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Insert your Alignment image into your document for Publication

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Introduction to Bioinformatics online course : IBT_2016 Trainer name: Prof. Ahmed Mansour Alzohairy

Department of Genetics, Zagazig University, Zagazig, Egypt

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